JASPAR motif
MA0884.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2209 | 0.3087 | 0.1913 | 0.2791 |
| 2 | 0.1460 | 0.1726 | 0.0672 | 0.6142 |
| 3 | 0.6353 | 0.0049 | 0.3482 | 0.0116 |
| 4 | 0.9788 | 0.0058 | 0.0106 | 0.0048 |
| 5 | 0.1067 | 0.3090 | 0.0980 | 0.4863 |
| 6 | 0.0118 | 0.3866 | 0.1903 | 0.4112 |
| 7 | 0.0154 | 0.2298 | 0.0775 | 0.6774 |
| 8 | 0.8903 | 0.0492 | 0.0413 | 0.0193 |
| 9 | 0.9769 | 0.0067 | 0.0096 | 0.0067 |
| 10 | 0.0000 | 0.0010 | 0.0049 | 0.9941 |
| 11 | 0.0000 | 0.9013 | 0.0027 | 0.0960 |
| 12 | 0.8543 | 0.0244 | 0.0438 | 0.0775 |
| 13 | 0.3590 | 0.1755 | 0.2791 | 0.1864 |
TFs using this motif
1 known/direct, 0 nearest-neighbor >70%, 5 nearest-neighbor 50–70%, 0 structure-derived. Showing all 6 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A6NLW8 | Known | Homeobox,CENP-B_N,Homeobox_KN,CS | |
| W5S2M5 | Nearest Neighbor (50–70%) | 58.0% | Pax7,Homeobox_KN,Homeobox |
| A0AAQ5BGK0 | Nearest Neighbor (50–70%) | 54.3% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 53.2% | WWbp,Homeobox,Homeobox_KN |
| A0A5F9ZHY1 | Nearest Neighbor (50–70%) | 52.6% | Homeobox |
| Q12777 | Nearest Neighbor (50–70%) | 51.7% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |