CisBP motif
M02017_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2461 | 0.2640 | 0.2511 | 0.2388 |
| 2 | 0.2896 | 0.2647 | 0.1757 | 0.2700 |
| 3 | 0.1011 | 0.1084 | 0.6963 | 0.0942 |
| 4 | 0.7945 | 0.0347 | 0.0446 | 0.1262 |
| 5 | 0.0256 | 0.0624 | 0.0467 | 0.8653 |
| 6 | 0.4496 | 0.1605 | 0.0974 | 0.2925 |
| 7 | 0.2958 | 0.2327 | 0.2650 | 0.2064 |
| 8 | 0.2241 | 0.2764 | 0.2820 | 0.2175 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 9 nearest-neighbor 50–70%, 0 structure-derived. Showing all 9 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| R9UV10 | Nearest Neighbor (50–70%) | 69.6% | zf-ribbon_3,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,GATA,A2L_zn_ribbon |
| Q53EU2 | Nearest Neighbor (50–70%) | 60.7% | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| Q16365 | Nearest Neighbor (50–70%) | 58.8% | Elf1,DUF2387,BaffR-Tall_bind,Golgin_A5,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| E5RFF3 | Nearest Neighbor (50–70%) | 55.0% | zf-C2H2_4,GATA,zf-H2C2_5 |
| H0YAV4 | Nearest Neighbor (50–70%) | 55.0% | TF_Zn_Ribbon,eIF-5_eIF-2B,GATA |
| Q9UHF7 | Nearest Neighbor (50–70%) | 55.0% | GATA,zf-H2C2_5 |
| B5MCP8 | Nearest Neighbor (50–70%) | 53.4% | ArfGap,zf-trcl,TF_Zn_Ribbon,RRN7,DZR,GATA,NOB1_Zn_bind |
| P0C6A0 | Nearest Neighbor (50–70%) | 53.4% | DZR,ArfGap,GATA |
| A0A8Q3SIT6 | Nearest Neighbor (50–70%) | 50.7% | Elf1,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon |