CisBP motif
M02454_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1309 | 0.3352 | 0.3285 | 0.2053 |
| 2 | 0.0523 | 0.0005 | 0.9410 | 0.0062 |
| 3 | 0.0195 | 0.0426 | 0.0393 | 0.8986 |
| 4 | 0.2060 | 0.2060 | 0.0226 | 0.5655 |
| 5 | 0.2561 | 0.0354 | 0.5368 | 0.1717 |
| 6 | 0.0370 | 0.7074 | 0.0569 | 0.1987 |
| 7 | 0.0252 | 0.4142 | 0.0888 | 0.4718 |
| 8 | 0.6981 | 0.0751 | 0.1213 | 0.1055 |
| 9 | 0.2872 | 0.1691 | 0.2732 | 0.2705 |
| 10 | 0.1508 | 0.1569 | 0.6053 | 0.0870 |
TFs using this motif
0 known/direct, 1 nearest-neighbor >70%, 6 nearest-neighbor 50–70%, 0 structure-derived. Showing all 7 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| F6UGA0 | Nearest Neighbor (>70%) | 79.7% | RFX_DNA_binding,Pox_D5,RFX1_trans_act |
| B7Z7Y7 | Nearest Neighbor (50–70%) | 59.8% | RFX_DNA_binding |
| P22670 | Nearest Neighbor (50–70%) | 59.0% | RFX_DNA_binding,Nucleoplasmin,RFX1_trans_act |
| B7Z8F5 | Nearest Neighbor (50–70%) | 58.7% | RFX1_trans_act |
| D6RAX4 | Nearest Neighbor (50–70%) | 54.3% | RFX_DNA_binding |
| E9PDA6 | Nearest Neighbor (50–70%) | 54.3% | RFX_DNA_binding |
| Q6ZNB4 | Nearest Neighbor (50–70%) | 52.6% | RFX_DNA_binding |