CisBP motif
M02487_2.00
Source: CisBP
Sequence logo
Matrix
11 positions
| Position |
A |
C |
G |
T |
| 1 |
0.1987 |
0.1987 |
0.1987 |
0.4038 |
| 2 |
0.3164 |
0.1274 |
0.1274 |
0.4287 |
| 3 |
0.9321 |
0.0226 |
0.0226 |
0.0226 |
| 4 |
0.0002 |
0.0002 |
0.0002 |
0.9994 |
| 5 |
0.1893 |
0.0002 |
0.0002 |
0.8103 |
| 6 |
0.9994 |
0.0002 |
0.0002 |
0.0002 |
| 7 |
0.0002 |
0.0002 |
0.0002 |
0.9994 |
| 8 |
0.5784 |
0.0002 |
0.0932 |
0.3282 |
| 9 |
0.1495 |
0.1776 |
0.0515 |
0.6215 |
| 10 |
0.4076 |
0.1228 |
0.1228 |
0.3469 |
| 11 |
0.2275 |
0.2275 |
0.2275 |
0.3174 |
TFs using this motif
10 linked TF records
0 known/direct,
4 nearest-neighbor >70%,
6 nearest-neighbor 50–70%,
0 structure-derived.
Showing all 10 assignments.
| TF record |
Motif assignment |
Identity |
PFAM Families |
| Q9P0W2 |
Nearest Neighbor (>70%) |
93.6% |
HMG_box,DUF1898,IncA,DUF3584 |
| A8K0D5 |
Nearest Neighbor (>70%) |
93.3% |
DUF3584,HMG_box,DUF1898,IncA,OmpH |
| C9J8X5 |
Nearest Neighbor (>70%) |
92.5% |
HMG_box,DUF1898,Tol_Tol_Ttg2 |
| C9K049 |
Nearest Neighbor (>70%) |
83.0% |
HMG_box,DUF1898 |
| H0YMS9 |
Nearest Neighbor (50–70%) |
68.9% |
HMG_box |
| H0YNS8 |
Nearest Neighbor (50–70%) |
66.2% |
HMG_box,DUF1898 |
| H0YKM5 |
Nearest Neighbor (50–70%) |
63.5% |
HMG_box,DUF1898 |
| H0YKL0 |
Nearest Neighbor (50–70%) |
53.9% |
Filament,Translin,DivIC,GAS,Fib_alpha,TMF_DNA_bd,DUF972,Trans_reg_C,Bcr-Abl_Oligo,IncA,bZIP_2,Atg14,HALZ,DMPK_coil |
| Q9NP66 |
Nearest Neighbor (50–70%) |
53.1% |
HMG_box,DUF1898,LMSTEN |
| B4DMG1 |
Nearest Neighbor (50–70%) |
52.5% |
HMG_box,Aldedh,DUF1898,Trans_reg_C,LMSTEN |