JASPAR motif
MA0482.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0036 | 0.3784 | 0.1362 | 0.4818 |
| 2 | 0.0000 | 0.7884 | 0.1114 | 0.1001 |
| 3 | 0.0000 | 0.0324 | 0.0000 | 0.9676 |
| 4 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 5 | 0.9858 | 0.0142 | 0.0000 | 0.0000 |
| 6 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 7 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 8 | 0.1992 | 0.0000 | 0.0000 | 0.8008 |
| 9 | 0.0000 | 0.4516 | 0.3423 | 0.2061 |
| 10 | 0.2189 | 0.3656 | 0.0572 | 0.3583 |
| 11 | 0.1406 | 0.3383 | 0.2484 | 0.2728 |
TFs using this motif
0 known/direct, 5 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 9 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q16365 | Nearest Neighbor (>70%) | 92.8% | Elf1,DUF2387,BaffR-Tall_bind,Golgin_A5,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| R9UV10 | Nearest Neighbor (>70%) | 78.9% | zf-ribbon_3,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,GATA,A2L_zn_ribbon |
| E5RFF3 | Nearest Neighbor (>70%) | 70.7% | zf-C2H2_4,GATA,zf-H2C2_5 |
| Q9UHF7 | Nearest Neighbor (>70%) | 70.7% | GATA,zf-H2C2_5 |
| A0A8Q3SIT6 | Nearest Neighbor (>70%) | 70.4% | Elf1,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon |
| H0YAV4 | Nearest Neighbor (50–70%) | 64.2% | TF_Zn_Ribbon,eIF-5_eIF-2B,GATA |
| B5MCP8 | Nearest Neighbor (50–70%) | 51.5% | ArfGap,zf-trcl,TF_Zn_Ribbon,RRN7,DZR,GATA,NOB1_Zn_bind |
| P0C6A0 | Nearest Neighbor (50–70%) | 51.5% | DZR,ArfGap,GATA |
| Q53EU2 | Nearest Neighbor (50–70%) | 51.5% | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |