JASPAR motif
MA0035.4
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3092 | 0.1700 | 0.1943 | 0.3265 |
| 2 | 0.2412 | 0.2017 | 0.1544 | 0.4027 |
| 3 | 0.0550 | 0.8690 | 0.0378 | 0.0382 |
| 4 | 0.0183 | 0.0083 | 0.0091 | 0.9643 |
| 5 | 0.6918 | 0.0099 | 0.0119 | 0.2864 |
| 6 | 0.9404 | 0.0180 | 0.0138 | 0.0278 |
| 7 | 0.0307 | 0.0172 | 0.0086 | 0.9434 |
| 8 | 0.0357 | 0.9180 | 0.0205 | 0.0258 |
| 9 | 0.1030 | 0.0421 | 0.0106 | 0.8443 |
| 10 | 0.3696 | 0.1557 | 0.1999 | 0.2748 |
| 11 | 0.3154 | 0.2125 | 0.1298 | 0.3423 |
TFs using this motif
1 known/direct, 4 nearest-neighbor >70%, 5 nearest-neighbor 50–70%, 0 structure-derived. Showing all 10 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| P15976 | Known | Elf1,Zn_Tnp_IS91,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon | |
| R9UV10 | Nearest Neighbor (>70%) | 97.6% | zf-ribbon_3,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,GATA,A2L_zn_ribbon |
| A0A8Q3SIT6 | Nearest Neighbor (>70%) | 96.2% | Elf1,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon |
| Q16365 | Nearest Neighbor (>70%) | 78.8% | Elf1,DUF2387,BaffR-Tall_bind,Golgin_A5,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| Q53EU2 | Nearest Neighbor (>70%) | 74.3% | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| E5RFF3 | Nearest Neighbor (50–70%) | 62.7% | zf-C2H2_4,GATA,zf-H2C2_5 |
| Q9UHF7 | Nearest Neighbor (50–70%) | 62.7% | GATA,zf-H2C2_5 |
| H0YAV4 | Nearest Neighbor (50–70%) | 56.8% | TF_Zn_Ribbon,eIF-5_eIF-2B,GATA |
| B5MCP8 | Nearest Neighbor (50–70%) | 51.6% | ArfGap,zf-trcl,TF_Zn_Ribbon,RRN7,DZR,GATA,NOB1_Zn_bind |
| P0C6A0 | Nearest Neighbor (50–70%) | 51.6% | DZR,ArfGap,GATA |