JASPAR motif
MA1104.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2864 | 0.2091 | 0.2282 | 0.2763 |
| 2 | 0.3270 | 0.1596 | 0.2466 | 0.2668 |
| 3 | 0.2776 | 0.2681 | 0.2771 | 0.1772 |
| 4 | 0.8626 | 0.0123 | 0.0118 | 0.1132 |
| 5 | 0.0113 | 0.0055 | 0.9805 | 0.0028 |
| 6 | 0.9786 | 0.0065 | 0.0083 | 0.0066 |
| 7 | 0.0175 | 0.0075 | 0.0140 | 0.9610 |
| 8 | 0.9406 | 0.0100 | 0.0110 | 0.0384 |
| 9 | 0.9579 | 0.0042 | 0.0185 | 0.0194 |
| 10 | 0.0510 | 0.0959 | 0.8306 | 0.0225 |
| 11 | 0.6724 | 0.1004 | 0.1906 | 0.0366 |
| 12 | 0.3390 | 0.1661 | 0.2394 | 0.2554 |
| 13 | 0.3730 | 0.1806 | 0.2036 | 0.2427 |
TFs using this motif
1 known/direct, 5 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 10 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q92908 | Known | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA | |
| Q53EU2 | Nearest Neighbor (>70%) | 99.8% | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| Q16365 | Nearest Neighbor (>70%) | 79.0% | Elf1,DUF2387,BaffR-Tall_bind,Golgin_A5,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| R9UV10 | Nearest Neighbor (>70%) | 76.3% | zf-ribbon_3,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,GATA,A2L_zn_ribbon |
| E5RFF3 | Nearest Neighbor (>70%) | 70.7% | zf-C2H2_4,GATA,zf-H2C2_5 |
| Q9UHF7 | Nearest Neighbor (>70%) | 70.7% | GATA,zf-H2C2_5 |
| A0A8Q3SIT6 | Nearest Neighbor (50–70%) | 66.3% | Elf1,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon |
| H0YAV4 | Nearest Neighbor (50–70%) | 62.5% | TF_Zn_Ribbon,eIF-5_eIF-2B,GATA |
| B5MCP8 | Nearest Neighbor (50–70%) | 51.5% | ArfGap,zf-trcl,TF_Zn_Ribbon,RRN7,DZR,GATA,NOB1_Zn_bind |
| P0C6A0 | Nearest Neighbor (50–70%) | 51.5% | DZR,ArfGap,GATA |