CisBP motif
M01445_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3521 | 0.2728 | 0.1876 | 0.1876 |
| 2 | 0.0002 | 0.9995 | 0.0002 | 0.0002 |
| 3 | 0.9037 | 0.0960 | 0.0002 | 0.0002 |
| 4 | 0.0002 | 0.9995 | 0.0002 | 0.0002 |
| 5 | 0.0002 | 0.0002 | 0.6835 | 0.3162 |
| 6 | 0.0002 | 0.6263 | 0.0002 | 0.3734 |
| 7 | 0.0002 | 0.9995 | 0.0002 | 0.0002 |
| 8 | 0.0002 | 0.0002 | 0.9995 | 0.0002 |
| 9 | 0.0626 | 0.3830 | 0.0626 | 0.4918 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 16 nearest-neighbor 50–70%, 0 structure-derived. Showing all 16 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q7RTV3 | Nearest Neighbor (50–70%) | 56.9% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| B4DM69 | Nearest Neighbor (50–70%) | 53.8% | zf-C2H2_4,C1_4,zf-C2H2,FYVE,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,Baculo_IE-1,Ring_hydroxyl_B,Zn_Tnp_IS1595,DUF82,zf-MYND,Yippee,zf-C2H2_6,BolA |
| I6V2Q9 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_4,Succ_CoA_lig,DUF2256,Chordopox_RPO7,NADH_oxidored,DUF2321,zf-C2H2_6,zf-UBP,PHD,DZR,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,HTH_18,DUF164,CpXC |
| Q9BY29 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,Rapsyn_N,zf-H2C2_2,Yippee,C1_4,TFIIS_C,zf-CHY,Zn_Tnp_IS1595,zf-C2H2_6,PHD,DUF4389,GATA,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,CpXC,BHD_1,BolA |
| A8K350 | Nearest Neighbor (50–70%) | 50.6% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| Q4G0T0 | Nearest Neighbor (50–70%) | 50.6% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| B2R8P9 | Nearest Neighbor (50–70%) | 50.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| B2RCZ6 | Nearest Neighbor (50–70%) | 50.5% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| B7ZAX4 | Nearest Neighbor (50–70%) | 50.5% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| A0A494C070 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| B7ZLN9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| H0Y7L6 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| Q59EY3 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q6BEB4 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-ribbon_3,zinc_ribbon_5,zf-C2H2_jaz,zinc_ribbon_4,zf-met,zf-H2C2_2,GFA |
| Q8WWU2 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q8WWU3 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |