CisBP motif
M05798_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3173 | 0.1860 | 0.2287 | 0.2680 |
| 2 | 0.4197 | 0.0940 | 0.2939 | 0.1924 |
| 3 | 0.7662 | 0.0282 | 0.1521 | 0.0535 |
| 4 | 0.0803 | 0.1152 | 0.7657 | 0.0387 |
| 5 | 0.0123 | 0.0000 | 0.9783 | 0.0094 |
| 6 | 0.0031 | 0.2535 | 0.0110 | 0.7324 |
| 7 | 0.0070 | 0.0021 | 0.9909 | 0.0000 |
| 8 | 0.0731 | 0.0576 | 0.0247 | 0.8446 |
| 9 | 0.0204 | 0.1111 | 0.7087 | 0.1597 |
| 10 | 0.9447 | 0.0036 | 0.0403 | 0.0115 |
| 11 | 0.7008 | 0.0548 | 0.1119 | 0.1324 |
| 12 | 0.4594 | 0.1931 | 0.2044 | 0.1430 |
TFs using this motif
3 known/direct, 4 nearest-neighbor >70%, 11 nearest-neighbor 50–70%, 0 structure-derived. Showing all 18 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| U3KQ31 | Known | T-box | |
| U3KQQ9 | Known | T-box | |
| O95935 | Known | T-box | |
| Q9Y458 | Nearest Neighbor (>70%) | 74.0% | T-box |
| C3RYR1 | Nearest Neighbor (>70%) | 73.6% | T-box |
| B3KUL8 | Nearest Neighbor (>70%) | 72.6% | T-box |
| A0A385I6V6 | Nearest Neighbor (>70%) | 72.4% | T-box |
| A0A3B3IS18 | Nearest Neighbor (50–70%) | 62.2% | T-box |
| O75333 | Nearest Neighbor (50–70%) | 61.2% | ABC_transp_aux,T-box |
| X5D304 | Nearest Neighbor (50–70%) | 56.0% | T-box |
| Q59FT1 | Nearest Neighbor (50–70%) | 55.7% | TBX,T-box |
| B7Z5X5 | Nearest Neighbor (50–70%) | 55.3% | T-box |
| A8K3J6 | Nearest Neighbor (50–70%) | 55.1% | T-box |
| Q69YM3 | Nearest Neighbor (50–70%) | 55.1% | TBX,T-box |
| A0A8C8P5L8 | Nearest Neighbor (50–70%) | 54.5% | HLH,T-box |
| A0A994J6L2 | Nearest Neighbor (50–70%) | 54.5% | HLH,T-box |
| X5DP27 | Nearest Neighbor (50–70%) | 54.3% | T-box |
| H7C0B1 | Nearest Neighbor (50–70%) | 52.9% | Nairo_nucleo,T-box |