JASPAR motif
MA0736.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0457 | 0.1104 | 0.5731 | 0.2708 |
| 2 | 0.7832 | 0.0906 | 0.1252 | 0.0010 |
| 3 | 0.0028 | 0.9898 | 0.0028 | 0.0046 |
| 4 | 0.0037 | 0.9954 | 0.0000 | 0.0009 |
| 5 | 0.0064 | 0.9808 | 0.0000 | 0.0128 |
| 6 | 0.0018 | 0.9982 | 0.0000 | 0.0000 |
| 7 | 0.0500 | 0.9465 | 0.0000 | 0.0036 |
| 8 | 0.0430 | 0.8742 | 0.0008 | 0.0820 |
| 9 | 0.2966 | 0.0086 | 0.6587 | 0.0360 |
| 10 | 0.0025 | 0.9153 | 0.0237 | 0.0585 |
| 11 | 0.3127 | 0.0245 | 0.6192 | 0.0436 |
| 12 | 0.5031 | 0.0166 | 0.2432 | 0.2370 |
| 13 | 0.4149 | 0.2701 | 0.1142 | 0.2008 |
| 14 | 0.0114 | 0.1421 | 0.7986 | 0.0479 |
TFs using this motif
2 known/direct, 0 nearest-neighbor >70%, 16 nearest-neighbor 50–70%, 0 structure-derived. Showing all 18 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| B3KTH4 | Known | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6 | |
| Q9BZE0 | Known | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6 | |
| F8VS19 | Nearest Neighbor (50–70%) | 60.9% | zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,Zn_ribbon_recom,Evr1_Alr,Prok-RING_2,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,Fer4_10,C1_1,NinG,A2L_zn_ribbon,C1_4,TFIIS_C,zf-CHY,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-MYND,zf-C2H2_6,C1_2,Desulfoferrod_N,TF_Zn_Ribbon,SprT-like,zf-BED,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,Fer4_7,CpXC |
| A8K3T5 | Nearest Neighbor (50–70%) | 60.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-H2C2_2,HypA,zf-DNA_Pol,DUF2752,Rad50_zn_hook,Zn_Tnp_IS1595,zf-Mss51,Terminase_GpA,zf-C2H2_6,Prok-RING_1,zf-H2C2_5,DUF2225,DZR,Elf1,CxxC_CxxC_SSSS,zf-C2H2_2 |
| Q9P2Y4 | Nearest Neighbor (50–70%) | 60.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-H2C2_2,HypA,zf-DNA_Pol,DUF2752,Rad50_zn_hook,Zn_Tnp_IS1595,zf-Mss51,Terminase_GpA,zf-C2H2_6,Prok-RING_1,zf-H2C2_5,DUF2225,DZR,Elf1,CxxC_CxxC_SSSS,zf-C2H2_2 |
| B4DNF7 | Nearest Neighbor (50–70%) | 58.1% | zf-C2H2_4,CHORD,zf-C2H2,IL17,zf-H2C2_2,zf-H2C2_5,zf-C2H2_6 |
| P08151 | Nearest Neighbor (50–70%) | 58.1% | zf-C2H2_4,CHORD,zf-C2H2,IL17,zf-H2C2_2,zf-C2H2_6 |
| Q15924 | Nearest Neighbor (50–70%) | 53.8% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| F5H2K2 | Nearest Neighbor (50–70%) | 53.6% | zf-C2H2_4,zf-C2H2,PRP21_like_P,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 |
| A0A7I2V4X9 | Nearest Neighbor (50–70%) | 53.4% | zf-C2H2_4,zf-H2C2_2,zf-C2H2 |
| B4DRK1 | Nearest Neighbor (50–70%) | 53.4% | zf-C2H2_4,zf-H2C2_2,zf-C2H2 |
| A0A7I2PJA1 | Nearest Neighbor (50–70%) | 53.2% | zf-C2H2_4,zf-H2C2_2,zf-C2H2,TP1 |
| Q0VGA0 | Nearest Neighbor (50–70%) | 53.2% | zf-C2H2_4,zf-H2C2_2,zf-C2H2,TP1 |
| O14861 | Nearest Neighbor (50–70%) | 50.8% | zf-C2H2_4,Fer4_17,zf-C2H2,UPF0547,Evr1_Alr,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-H2C2_2,Yippee,HypA,C1_1,A2L_zn_ribbon,C1_4,zf-RING_3,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-UBR,zf-Mss51,zinc_ribbon_2,zf-C2H2_6,C1_2,Prok-RING_1,Tnp_zf-ribbon_2,PHD,ADK_lid,SprT-like,DNA_RNApol_7kD,zf-trcl,zinc_ribbon_4,DUF1610,CxxC_CxxC_SSSS,DUF164,CpXC,Ribosomal_L44 |
| B4DS26 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-DBF,Elf1,zf-C2H2,Zn_ribbon_recom,zf-C2H2_jaz,zf-met,zf-H2C2_2,Homeobox,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2H2_6 |
| H0YND9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-RING_3,Sgf11,zf-C2H2,Zn_ribbon_recom,zinc_ribbon_5,zf-C2H2_jaz,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_2,zf-H2C2_5,zf-C2H2_6 |
| O15062 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Rota_NS35,APP_N,zf-H2C2_2,BTB,DUF3342 |
| Q5T942 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Rota_NS35,APP_N,zf-H2C2_2,BTB,DUF3342 |