JASPAR motif
MA1645.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2672 | 0.2674 | 0.1884 | 0.2769 |
| 2 | 0.3637 | 0.2167 | 0.1865 | 0.2331 |
| 3 | 0.2803 | 0.2136 | 0.2432 | 0.2629 |
| 4 | 0.0937 | 0.7775 | 0.0881 | 0.0407 |
| 5 | 0.0237 | 0.9354 | 0.0068 | 0.0341 |
| 6 | 0.9126 | 0.0178 | 0.0099 | 0.0598 |
| 7 | 0.0184 | 0.9489 | 0.0161 | 0.0166 |
| 8 | 0.0188 | 0.0174 | 0.0113 | 0.9525 |
| 9 | 0.0153 | 0.9245 | 0.0322 | 0.0281 |
| 10 | 0.8195 | 0.1065 | 0.0223 | 0.0517 |
| 11 | 0.7687 | 0.0809 | 0.0871 | 0.0634 |
| 12 | 0.2655 | 0.2547 | 0.2916 | 0.1882 |
| 13 | 0.3067 | 0.2283 | 0.2134 | 0.2516 |
| 14 | 0.2849 | 0.2410 | 0.2325 | 0.2417 |
TFs using this motif
1 known/direct, 2 nearest-neighbor >70%, 14 nearest-neighbor 50–70%, 0 structure-derived. Showing all 17 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| O95096 | Known | Homeobox | |
| A1ECB6 | Nearest Neighbor (>70%) | 77.5% | Homeobox,Homez |
| A6NCS4 | Nearest Neighbor (>70%) | 73.0% | Homeobox,Homez |
| Q9H2Z4 | Nearest Neighbor (50–70%) | 69.6% | Homeobox |
| A0A2R4LFK0 | Nearest Neighbor (50–70%) | 68.8% | Homeobox,Homez |
| A0A165EY39 | Nearest Neighbor (50–70%) | 68.4% | Homeobox,Homez |
| A1ECD1 | Nearest Neighbor (50–70%) | 68.4% | Homeobox,Homez |
| Q13028 | Nearest Neighbor (50–70%) | 61.7% | Homeobox,Homeobox_KN,Homez |
| Q15270 | Nearest Neighbor (50–70%) | 51.6% | Homeobox |
| Q14548 | Nearest Neighbor (50–70%) | 51.2% | Homeobox |
| A0A669K9T0 | Nearest Neighbor (50–70%) | 50.8% | Hox9_act,HTH_23,Homeobox |
| A0A669KBC8 | Nearest Neighbor (50–70%) | 50.8% | Hox9_act,HTH_23,Homeobox |
| O75805 | Nearest Neighbor (50–70%) | 50.8% | Homeobox |
| B7ZMC8 | Nearest Neighbor (50–70%) | 50.0% | SAGA-Tad1,Homeobox |
| O60863 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,Terminase_5,Homeobox_KN,Homez |
| Q9UD57 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |
| Q9UDY3 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,DUF1183,QLQ,MRP-S27 |