CisBP motif
M02426_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.9712 | 0.0096 | 0.0096 | 0.0096 |
| 2 | 0.0096 | 0.9712 | 0.0096 | 0.0096 |
| 3 | 0.0096 | 0.9712 | 0.0096 | 0.0096 |
| 4 | 0.0049 | 0.0049 | 0.9853 | 0.0049 |
| 5 | 0.0049 | 0.0049 | 0.0049 | 0.9853 |
| 6 | 0.0049 | 0.0049 | 0.9853 | 0.0049 |
| 7 | 0.9853 | 0.0049 | 0.0049 | 0.0049 |
| 8 | 0.0049 | 0.4951 | 0.0049 | 0.4951 |
| 9 | 0.0096 | 0.9712 | 0.0096 | 0.0096 |
| 10 | 0.9712 | 0.0096 | 0.0096 | 0.0096 |
| 11 | 0.0096 | 0.9712 | 0.0096 | 0.0096 |
TFs using this motif
0 known/direct, 12 nearest-neighbor >70%, 17 nearest-neighbor 50–70%, 0 structure-derived. Showing all 29 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A7P0TAC9 | Nearest Neighbor (>70%) | 75.3% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| A0A9L9PYK3 | Nearest Neighbor (>70%) | 75.3% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| Q5SZP1 | Nearest Neighbor (>70%) | 75.3% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| G3V5S4 | Nearest Neighbor (>70%) | 74.0% | HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| Q6YFJ8 | Nearest Neighbor (>70%) | 74.0% | HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (>70%) | 73.8% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| C7FNH7 | Nearest Neighbor (>70%) | 73.6% | HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_23,PAX |
| E7EQT0 | Nearest Neighbor (>70%) | 72.9% | HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,Homeobox,HTH_32,HTH_23,PAX |
| A0A0A0MRH7 | Nearest Neighbor (>70%) | 72.3% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| A0A7P0T907 | Nearest Neighbor (>70%) | 72.2% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| Q06710 | Nearest Neighbor (>70%) | 72.2% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| R9W7C9 | Nearest Neighbor (>70%) | 72.2% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 68.2% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| B3KQG1 | Nearest Neighbor (50–70%) | 68.2% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| B2R940 | Nearest Neighbor (50–70%) | 67.4% | HTH_29,HTH_28,HTH_32,HTH_23,PAX |
| A0A0S2Z4P2 | Nearest Neighbor (50–70%) | 65.6% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,HTH_23,PAX |
| Q56H36 | Nearest Neighbor (50–70%) | 65.2% | HTH_Tnp_IS1,HTH_5,Fe_dep_repress,HTH_29,HTH_23,PAX |
| A0AAQ5BGK0 | Nearest Neighbor (50–70%) | 65.0% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A1P8LI09 | Nearest Neighbor (50–70%) | 63.3% | MarR_2,HTH_29,HTH_28,HTH_32,HTH_23,PAX |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 63.2% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| E7ES87 | Nearest Neighbor (50–70%) | 61.7% | Homeobox,Pax2_C,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 61.4% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PQW3 | Nearest Neighbor (50–70%) | 60.4% | PAX,HTH_Tnp_IS1,HTH_32 |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 56.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 56.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 56.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 56.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 56.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| Q3KNR4 | Nearest Neighbor (50–70%) | 53.1% | Homeobox_KN,Homeobox,PAX |