CisBP motif
M06053_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0000 | 0.0000 | 0.6000 | 0.4000 |
| 2 | 0.4000 | 0.2000 | 0.2000 | 0.2000 |
| 3 | 0.6000 | 0.2000 | 0.2000 | 0.0000 |
| 4 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 5 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 6 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 7 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 8 | 0.0000 | 0.2000 | 0.0000 | 0.8000 |
| 9 | 0.6000 | 0.0000 | 0.2000 | 0.2000 |
| 10 | 0.8000 | 0.2000 | 0.0000 | 0.0000 |
| 11 | 0.2000 | 0.6000 | 0.0000 | 0.2000 |
| 12 | 0.2000 | 0.2000 | 0.4000 | 0.2000 |
| 13 | 0.0000 | 0.4000 | 0.6000 | 0.0000 |
| 14 | 0.0000 | 0.6000 | 0.0000 | 0.4000 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 33 nearest-neighbor 50–70%, 0 structure-derived. Showing all 33 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q86WM2 | Nearest Neighbor (50–70%) | 62.9% | zf-C2H2_4,Ribosomal_L37ae,zf-FPG_IleRS,zf-C2H2,Evr1_Alr,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_1,NinG,C1_4,TFIIS_C,zf-AN1,DUF2256,HTH_Tnp_ISL3,Zn_Tnp_IS1595,RRN7,zf-C2H2_6,Desulfoferrod_N,Prok-RING_1,zf-HIT,ADK_lid,DNA_RNApol_7kD,zf-BED,zf-trcl,CxxC_CxxC_SSSS,DUF164,CpXC,BolA |
| O43698 | Nearest Neighbor (50–70%) | 62.0% | zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,Evr1_Alr,C1_3,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,C1_4,zf-CHY,zf-AN1,YyzF,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-MYND,zf-C2H2_6,Desulfoferrod_N,zf-HIT,PHD,SprT-like,DZR,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,DUF164,Ribosomal_L44,Rep_fac-A_C |
| Q9BY29 | Nearest Neighbor (50–70%) | 61.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,Rapsyn_N,zf-H2C2_2,Yippee,C1_4,TFIIS_C,zf-CHY,Zn_Tnp_IS1595,zf-C2H2_6,PHD,DUF4389,GATA,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,CpXC,BHD_1,BolA |
| K7ESJ1 | Nearest Neighbor (50–70%) | 60.7% | zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,UPF0547,Evr1_Alr,Prok-RING_2,HTH_Tnp_IS66,YhfH,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,Yippee,HypA,C1_1,NinG,OrfB_Zn_ribbon,A2L_zn_ribbon,C1_4,TRP_2,TFIIS_C,zf-C2H2_3,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-UBR,zf-MYND,DUF2321,zf-Mss51,zf-C2H2_6,FYVE,Prok-RING_1,Tnp_zf-ribbon_2,DUF82,TF_Zn_Ribbon,ADK_lid,SprT-like,DZR,LIM,Med27,CpXC,Rpr2,zf-BED,DNA_RNApol_7kD,zf-trcl,zinc_ribbon_4,DUF2072,CxxC_CxxC_SSSS,DUF164,DUF2175,Ribosomal_L44,zf-LYAR,BolA |
| A0A0G2JQ90 | Nearest Neighbor (50–70%) | 60.0% | zf-C2H2_4,zf-C2H2,Evr1_Alr,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-H2C2_2,Yippee,GAGA,C1_4,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,C1_2,Prok-RING_1,SprT-like,PKD,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,Ribosomal_L44,BolA |
| B4DJ46 | Nearest Neighbor (50–70%) | 60.0% | zf-C2H2_4,zf-C2H2,Evr1_Alr,Prok-RING_2,Pilin_PilX,C1_3,zf-C2H2_jaz,YhfH,Ogr_Delta,XPA_N,zf-H2C2_2,HypA,Yippee,C1_1,NinG,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF35_N,zf-C2H2_6,Desulfoferrod_N,Prok-RING_1,zf-HIT,Tnp_zf-ribbon_2,ZZ,ADK_lid,LIM,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,zf-C2HC_2,FYDLN_acid,BHD_1,DUF2213,Ribosomal_L44,BolA |
| A8K8A2 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,SCAN,DNA_RNApol_7kD,zf-BED,zf-C2H2_jaz,zf-trcl,zf-met,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,HTH_18,Zn_Tnp_IS1595,Yippee,zf-C2H2_6 |
| B4DX96 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,SCAN,zf-BED,DNA_RNApol_7kD,zf-C2H2_jaz,zf-trcl,zf-AN1,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,HTH_18,Zn_Tnp_IS1595,zf-C2H2_6 |
| B7Z4L5 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,zf-C2H2,Prok-RING_2,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,Yippee,A2L_zn_ribbon,C1_4,zf-RING_3,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,Tnp_zf-ribbon_2,NanE,DUF82,DZR,LIM,Rpr2,zf-BED,DNA_RNApol_7kD,zf-trcl,DUF2072,CxxC_CxxC_SSSS,DUF164,BolA |
| G3V1M0 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,HypA,C1_4,zf-RING_3,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,FYVE,SCAN,zf-BED,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,HTH_18 |
| Q8N506 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,zf-C2H2,Prok-RING_2,YhfH,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,Yippee,HypA,C1_1,A2L_zn_ribbon,C1_4,zf-RING_3,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zf-UBP,FYVE,zf-CSL,zf-HIT,Rpr2,zf-BED,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,HTH_18,FYDLN_acid,Ribosomal_L44,BolA |
| Q9Y5A6 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,HypA,C1_4,zf-RING_3,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,SCAN,zf-BED,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,HTH_18 |
| B3KP91 | Nearest Neighbor (50–70%) | 56.2% | zf-C2H2_4,zf-C2H2,zf-ribbon_3,UPF0547,YhfH,zf-C2H2_jaz,Ogr_Delta,zf-met,zf-H2C2_2,HypA,A2L_zn_ribbon,C1_4,zf-RING_3,zinc_ribbon_5,TFIIS_C,Rad50_zn_hook,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zinc_ribbon_2,zf-C2H2_6,DUF2709,zf-HIT,DZR,DUF3113,CxxC_CxxC_SSSS,zf-C2HC_2,CpXC |
| O14885 | Nearest Neighbor (50–70%) | 55.1% | zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,Evr1_Alr,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,Ribosomal_L44,XPA_N,zf-met,zf-H2C2_2,Yippee,HypA,C1_1,OrfB_Zn_ribbon,A2L_zn_ribbon,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-Mss51,zf-C2H2_6,zinc_ribbon_2,Desulfoferrod_N,DUF1407,DUF2688,zf-HIT,Tnp_zf-ribbon_2,ZZ,DUF82,SprT-like,DZR,DUF3268,DNA_RNApol_7kD,zf-trcl,DUF1610,zinc_ribbon_4,CxxC_CxxC_SSSS,DUF164,CpXC,HTH_Tnp_IS66 |
| Q68D23 | Nearest Neighbor (50–70%) | 54.8% | zf-C2H2_4,zf-C2H2,tRNA-synt_2d,UPF0547,C1_3,zf-C2H2_jaz,BHD_2,XPA_N,Rapsyn_N,zf-H2C2_2,Yippee,C1_1,C1_4,TFIIS_C,zf-CHY,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Desulfoferrod_N,Prok-RING_1,ZZ,Scramblase,DNA_RNApol_7kD,zf-BED,CxxC_CxxC_SSSS,BHD_1,BolA |
| Q7Z3I7 | Nearest Neighbor (50–70%) | 54.1% | zf-C2H2_4,C1_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,CxxC_CxxC_SSSS,Yippee,Zn_Tnp_IS1595,MBD,FYDLN_acid,zf-C2H2_6 |
| Q9H963 | Nearest Neighbor (50–70%) | 53.8% | zf-C2H2_4,zf-C2H2,UPF0547,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-met,zf-H2C2_2,Cytochrome_cB,C1_1,Rubredoxin,zf-Paramyx-P,C1_4,zinc_ribbon_5,TFIIS_C,HNH,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-MYND,zf-C2H2_6,Desulfoferrod_N,C1_2,FYVE,Prok-RING_1,zf-HIT,ZZ,zf-BED,DNA_RNApol_7kD,zinc_ribbon_4,CxxC_CxxC_SSSS,zf-C2HC_2,CpXC,zf-LYAR |
| A0A8V8TLT3 | Nearest Neighbor (50–70%) | 53.5% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,zf-met,zf-H2C2_2,HypA,BTB,GAGA,C1_1,zinc_ribbon_5,zf-CHY,HTH_Tnp_ISL3,zf-C2H2_6,zf-H2C2_5,Elf1,zf-BED,zf-trcl,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,zf-LYAR |
| B2RD90 | Nearest Neighbor (50–70%) | 53.3% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| H3BS42 | Nearest Neighbor (50–70%) | 53.3% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| Q9H5H4 | Nearest Neighbor (50–70%) | 53.3% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| O43167 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,zf-C2H2,DUF2180,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,BTB,zf-C2HC_2,GAGA,zf-H2C2_5,zf-C2H2_6,zf-FCS,BolA |
| B4DI14 | Nearest Neighbor (50–70%) | 51.7% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,zf-met2,zf-met,XPA_N,zf-H2C2_2,HypA,C1_1,C1_4,zf-CHY,RRN7,zf-C2H2_6,zf-FCS,C1_2,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,FYDLN_acid,BolA |
| B4DSF4 | Nearest Neighbor (50–70%) | 51.7% | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,zf-C2H2_jaz,zf-trcl,zf-AN1,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,C1_1,FYDLN_acid,zf-C2H2_6 |
| O14889 | Nearest Neighbor (50–70%) | 51.7% | zf-C2H2_4,Fer4_17,Ribosomal_L37ae,zf-C2H2,Zn_ribbon_recom,UPF0547,Evr1_Alr,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,Ogr_Delta,XPA_N,zf-met,zf-H2C2_2,Yippee,HypA,C1_1,A2L_zn_ribbon,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,YyzF,Zn_Tnp_IS1595,zf-MYND,DUF35_N,RRN7,zf-C2H2_6,DUF2321,Desulfoferrod_N,C1_2,Fer4_2,FYVE,Prok-RING_1,zf-HIT,COX5B,Tnp_zf-ribbon_2,ZZ,PHD,DUF82,TF_Zn_Ribbon,SprT-like,DZR,DNA_RNApol_7kD,zf-BED,zf-trcl,zinc_ribbon_4,DUF1610,Fer4_4,CxxC_CxxC_SSSS,DUF164,CpXC,FYDLN_acid,Ribosomal_L44 |
| Q6ZNH5 | Nearest Neighbor (50–70%) | 51.5% | zf-C2H2_4,zf-C2H2,Zn_ribbon_recom,zf-C2H2_jaz,XPA_N,zf-H2C2_2,Yippee,HypA,GAGA,tRNA-synt_2b,C1_4,zf-RING_3,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,zf-UBP,LIM,Elf1,zf-trcl,CxxC_CxxC_SSSS,FYDLN_acid,zf-LYAR |
| Q6RFR6 | Nearest Neighbor (50–70%) | 51.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,Rapsyn_N,zf-H2C2_2,Yippee,HypA,C1_4,zf-RING_3,TFIIS_C,zinc_ribbon_5,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,ZZ,GATA,DNA_RNApol_7kD,zf-trcl,zinc_ribbon_4,CxxC_CxxC_SSSS,CpXC,BHD_1,Ribosomal_L44,BolA |
| B3KND7 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Rpr2,zf-C2H2,FYVE,zf-H2C2_2,DZR,Zn_Tnp_IS1595,GAGA,RRN7,zf-C2H2_6 |
| Q15924 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| Q59F07 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,DNA_RNApol_7kD,zf-trcl,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,C1_1,DUF2321,zf-C2H2_6,zf-LYAR |
| Q9H3U2 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Evr1_Alr,C1_3,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,GAGA,C1_1,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,C1_2,zf-HIT,DUF1062,ADK_lid,zf-H2C2_5,SprT-like,LIM,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,FYDLN_acid,Ribosomal_L44,BolA |
| Q9NW07 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Endonuclease_7,PGAMP,zf-C2H2_jaz,zf-met,zf-H2C2_2,GAGA,C1_1,FdhE,zf-CHY,Zn_Tnp_IS1595,zf-MYND,zf-C2H2_6,FYVE,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,zf-LYAR |
| Q9Y2X9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Rpr2,zf-C2H2,FYVE,zf-H2C2_2,DZR,Zn_Tnp_IS1595,zf-C2H2_6 |