JASPAR motif
MA0710.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2631 | 0.2655 | 0.3050 | 0.1665 |
| 2 | 0.0340 | 0.6135 | 0.0271 | 0.3255 |
| 3 | 0.2146 | 0.1210 | 0.0173 | 0.6471 |
| 4 | 0.7007 | 0.2929 | 0.0000 | 0.0065 |
| 5 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 6 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 7 | 0.0168 | 0.0028 | 0.0190 | 0.9615 |
| 8 | 0.8438 | 0.0000 | 0.0811 | 0.0751 |
| 9 | 0.3288 | 0.1801 | 0.3587 | 0.1323 |
| 10 | 0.1905 | 0.3602 | 0.2566 | 0.1927 |
TFs using this motif
1 known/direct, 1 nearest-neighbor >70%, 8 nearest-neighbor 50–70%, 0 structure-derived. Showing all 10 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A8MTQ0 | Known | Homeobox,HTH_23,Homez | |
| Q13028 | Nearest Neighbor (>70%) | 70.8% | Homeobox,Homeobox_KN,Homez |
| Q14548 | Nearest Neighbor (50–70%) | 60.0% | Homeobox |
| W5S2M5 | Nearest Neighbor (50–70%) | 58.6% | Pax7,Homeobox_KN,Homeobox |
| A0AAQ5BGK0 | Nearest Neighbor (50–70%) | 54.0% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| Q12777 | Nearest Neighbor (50–70%) | 53.2% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| O43711 | Nearest Neighbor (50–70%) | 50.9% | Tubulin_2,Homeobox,Homez |
| A0A455R6J4 | Nearest Neighbor (50–70%) | 50.0% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| Q15270 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |
| Q9UD57 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |