JASPAR motif
MA0732.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1948 | 0.3728 | 0.1607 | 0.2717 |
| 2 | 0.2675 | 0.2922 | 0.1151 | 0.3253 |
| 3 | 0.5851 | 0.3978 | 0.0057 | 0.0114 |
| 4 | 0.0011 | 0.9920 | 0.0000 | 0.0070 |
| 5 | 0.0288 | 0.0140 | 0.9415 | 0.0157 |
| 6 | 0.0000 | 0.9989 | 0.0011 | 0.0000 |
| 7 | 0.0000 | 0.9946 | 0.0000 | 0.0054 |
| 8 | 0.0000 | 0.9545 | 0.0037 | 0.0419 |
| 9 | 0.7115 | 0.2793 | 0.0068 | 0.0025 |
| 10 | 0.0000 | 0.9952 | 0.0037 | 0.0011 |
| 11 | 0.0174 | 0.0125 | 0.9586 | 0.0116 |
| 12 | 0.0010 | 0.9875 | 0.0005 | 0.0109 |
| 13 | 0.8069 | 0.0345 | 0.1074 | 0.0512 |
| 14 | 0.2438 | 0.3604 | 0.0661 | 0.3297 |
| 15 | 0.2393 | 0.2091 | 0.1390 | 0.4127 |
TFs using this motif
2 known/direct, 1 nearest-neighbor >70%, 24 nearest-neighbor 50–70%, 0 structure-derived. Showing all 27 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| B4DH80 | Known | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2,DUF3446,RRN7,zf-C2H2_6 | |
| Q06889 | Known | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2,DUF3446,RRN7,zf-C2H2_6 | |
| B7ZKU3 | Nearest Neighbor (>70%) | 74.7% | zf-C2H2_4,zf-C2H2,zf-BED,zf-met,zf-H2C2_2,zf-C2HC_2,RRN7,zf-C2H2_6 |
| B4DIY6 | Nearest Neighbor (50–70%) | 68.4% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,RRN7,zf-C2H2_6 |
| H0Y7K5 | Nearest Neighbor (50–70%) | 63.9% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| J3KNN9 | Nearest Neighbor (50–70%) | 63.9% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| B3KNE6 | Nearest Neighbor (50–70%) | 62.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| O75840 | Nearest Neighbor (50–70%) | 62.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| Q4ZG79 | Nearest Neighbor (50–70%) | 62.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| V5M1V5 | Nearest Neighbor (50–70%) | 62.5% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| A0A0A0MT54 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| A0A1W2PQQ0 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| A0A1W2PR07 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1,zf-C2HC_2 |
| A0A481V744 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| P19544 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| A0A223PZB5 | Nearest Neighbor (50–70%) | 60.7% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| H0YED9 | Nearest Neighbor (50–70%) | 55.0% | zf-C2H2_4,zf-C2H2,zinc_ribbon_4,zf-met,CCAP,zf-H2C2_2,zf-C2HC_2,WT1 |
| B3KRH5 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,zf-C2H2,Zn_ribbon_recom,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,zf-met,XPA_N,zf-H2C2_2,Yippee,Ring_hydroxyl_B,MBD,A2L_zn_ribbon,C1_4,TFIIS_C,DUF2256,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zf-UBP,Prok-RING_1,ADK_lid,LIM,GATA,DNA_RNApol_7kD,zf-BED,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,CpXC,FYDLN_acid,BolA |
| Q9H5V7 | Nearest Neighbor (50–70%) | 51.0% | zf-H2C2_2,zf-C2H2,zf-H2C2_5 |
| O95409 | Nearest Neighbor (50–70%) | 50.6% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| A8K360 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,ROS_MUCR,KRAB,ADK_lid,SprT-like,DNA_RNApol_7kD,DUF1610,CxxC_CxxC_SSSS,DUF164,Rep_fac-A_C,BolA |
| F5H2K2 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,PRP21_like_P,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 |
| K7ESJ1 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,UPF0547,Evr1_Alr,Prok-RING_2,HTH_Tnp_IS66,YhfH,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,Yippee,HypA,C1_1,NinG,OrfB_Zn_ribbon,A2L_zn_ribbon,C1_4,TRP_2,TFIIS_C,zf-C2H2_3,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-UBR,zf-MYND,DUF2321,zf-Mss51,zf-C2H2_6,FYVE,Prok-RING_1,Tnp_zf-ribbon_2,DUF82,TF_Zn_Ribbon,ADK_lid,SprT-like,DZR,LIM,Med27,CpXC,Rpr2,zf-BED,DNA_RNApol_7kD,zf-trcl,zinc_ribbon_4,DUF2072,CxxC_CxxC_SSSS,DUF164,DUF2175,Ribosomal_L44,zf-LYAR,BolA |
| Q15924 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| Q2NKJ9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,ROS_MUCR,KRAB,ADK_lid,SprT-like,DNA_RNApol_7kD,DUF1610,CxxC_CxxC_SSSS,DUF164,Rep_fac-A_C,BolA |
| Q5HYD6 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-BED,DNA_RNApol_7kD,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_6 |
| Q9H8G1 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,ROS_MUCR,KRAB,ADK_lid,SprT-like,DNA_RNApol_7kD,DUF1610,CxxC_CxxC_SSSS,DUF164,Rep_fac-A_C,BolA |