JASPAR motif
MA0743.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3565 | 0.1261 | 0.4335 | 0.0838 |
| 2 | 0.3917 | 0.1759 | 0.0771 | 0.3553 |
| 3 | 0.0151 | 0.0201 | 0.7039 | 0.2609 |
| 4 | 0.0047 | 0.9797 | 0.0020 | 0.0135 |
| 5 | 0.9466 | 0.0317 | 0.0000 | 0.0217 |
| 6 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 7 | 0.0007 | 0.9993 | 0.0000 | 0.0000 |
| 8 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 9 | 0.1145 | 0.0018 | 0.8807 | 0.0030 |
| 10 | 0.0000 | 0.0000 | 0.9988 | 0.0012 |
| 11 | 0.0000 | 0.0026 | 0.0018 | 0.9956 |
| 12 | 0.0878 | 0.0240 | 0.7427 | 0.1455 |
| 13 | 0.0735 | 0.1147 | 0.5465 | 0.2653 |
| 14 | 0.1491 | 0.2408 | 0.2376 | 0.3724 |
| 15 | 0.2191 | 0.2581 | 0.0961 | 0.4267 |
TFs using this motif
1 known/direct, 0 nearest-neighbor >70%, 23 nearest-neighbor 50–70%, 0 structure-derived. Showing all 24 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q9BWW7 | Known | zf-C2H2_4,zf-C2H2,zf-ribbon_3,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,HypA,C1_4,zf-CHY,zf-AN1,zf-C2H2_6,zf-FCS,SprT-like,DZR,LIM,Elf1,zf-BED,zf-C3HC4_2,CxxC_CxxC_SSSS,zf-C2H2_2 | |
| Q5HYD6 | Nearest Neighbor (50–70%) | 58.0% | zf-C2H2_4,zf-C2H2,zf-BED,DNA_RNApol_7kD,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_6 |
| A0A087WXW6 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,DUF2225,zf-LITAF-like,Elf1,zf-C2H2,zf-C2H2_jaz,zf-met,Rad50_zn_hook,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| A0A140TA70 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,DUF2225,zf-LITAF-like,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6,BolA |
| A0A140TA74 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,DUF2225,zf-LITAF-like,Elf1,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| A0A384MEH2 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,DUF2225,zf-LITAF-like,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6,BolA |
| A9JR48 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,DUF2225,zf-LITAF-like,Elf1,zf-C2H2,zf-C2H2_jaz,zf-met,Rad50_zn_hook,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| Q9BXA9 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,DUF2225,zf-LITAF-like,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6,BolA |
| B3KU97 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,zf-FPG_IleRS,PyrI_C,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,GAGA,zf-C2H2_6,BolA |
| Q504V9 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,PyrI_C,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,GAGA,zf-C2H2_6,BolA |
| B4DHH6 | Nearest Neighbor (50–70%) | 55.7% | zf-C2H2_4,Elf1,zf-C2H2,DUF3449,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| H3BSM9 | Nearest Neighbor (50–70%) | 55.7% | zf-C2H2_4,DUF2225,zf-LITAF-like,Elf1,zf-C2H2,DUF3449,Prok-RING_1,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,C1_1,zf-C2H2_6,BolA |
| Q9NSC2 | Nearest Neighbor (50–70%) | 55.7% | zf-C2H2_4,Elf1,zf-C2H2,DUF3449,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| V9HVY5 | Nearest Neighbor (50–70%) | 55.7% | zf-C2H2_4,Elf1,zf-C2H2,DUF3449,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| Q9UJQ4 | Nearest Neighbor (50–70%) | 53.7% | zf-C2H2_4,DUF2225,Elf1,zf-C2H2,zf-C2H2_jaz,zf-met,Rad50_zn_hook,zf-H2C2_2,zf-C2HC_2,zf-C2H2_6,NinF |
| A0A0A0MRR1 | Nearest Neighbor (50–70%) | 53.1% | zf-C2H2_4,PHF5,zf-C2H2,Zn_ribbon_recom,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_4,TFIIS_C,HNH,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zinc_ribbon_2,Prok-RING_1,zf-HIT,DZR,LIM,DNA_RNApol_7kD,zf-BED,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid |
| Q5VV50 | Nearest Neighbor (50–70%) | 53.1% | zf-C2H2_4,PHF5,zf-C2H2,Zn_ribbon_recom,C1_3,zf-C2H2_jaz,YhfH,zf-met,XPA_N,zf-H2C2_2,Yippee,C1_1,C1_4,TFIIS_C,HNH,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zinc_ribbon_2,Prok-RING_1,zf-HIT,zf-H2C2_5,DZR,LIM,DNA_RNApol_7kD,zf-BED,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| Q5VV52 | Nearest Neighbor (50–70%) | 53.1% | zf-C2H2_4,PHF5,zf-C2H2,C1_3,zf-C2H2_jaz,YhfH,zf-met,XPA_N,zf-H2C2_2,Yippee,C1_1,C1_4,TFIIS_C,HNH,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zinc_ribbon_2,Prok-RING_1,zf-HIT,zf-H2C2_5,DZR,LIM,DNA_RNApol_7kD,zf-BED,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| F5H2K2 | Nearest Neighbor (50–70%) | 52.9% | zf-C2H2_4,zf-C2H2,PRP21_like_P,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 |
| A0A0C4DGQ9 | Nearest Neighbor (50–70%) | 52.3% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,KRAB,zf-met,zf-H2C2_2,HTH_Tnp_ISL3,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2H2_6 |
| O14849 | Nearest Neighbor (50–70%) | 51.6% | zf-C2H2_4,zf-H2C2_2,zf-C2H2_6,zf-C2H2 |
| B4DFD9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,FYVE,Prok-RING_1,zf-C2H2_jaz,zf-met,Rad50_zn_hook,zf-H2C2_2,zf-C2H2_2,Daxx,zf-C2HC_2,BSP_II,zf-C2H2_6,zf-FCS,NOA36 |
| Q13580 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,zf-met2,zf-met,XPA_N,zf-H2C2_2,Yippee,Fer4_14,HypA,C1_1,NinG,A2L_zn_ribbon,C1_4,zf-CHY,zf-AN1,DUF2256,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,C1_2,Prok-RING_1,DUF1062,DUF2039,CpXC,zf-BED,zf-trcl,CxxC_CxxC_SSSS,Syja_N,DUF3222,DUF2175,BHD_1 |
| Q9UFH1 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,C1_1,C1_4,HNH,DUF2256,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,DUF3449,Desulfoferrod_N,C1_2,zf-HIT,ZZ,ADK_lid,DUF1610,CxxC_CxxC_SSSS,CpXC,BolA |