JASPAR motif
MA0657.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.4624 | 0.0761 | 0.2806 | 0.1809 |
| 2 | 0.2194 | 0.0138 | 0.2383 | 0.5286 |
| 3 | 0.2874 | 0.0000 | 0.7036 | 0.0090 |
| 4 | 0.3141 | 0.5845 | 0.0367 | 0.0646 |
| 5 | 0.0706 | 0.8701 | 0.0019 | 0.0574 |
| 6 | 0.9954 | 0.0000 | 0.0046 | 0.0000 |
| 7 | 0.0000 | 0.9927 | 0.0051 | 0.0022 |
| 8 | 0.0078 | 0.0007 | 0.9886 | 0.0029 |
| 9 | 0.0000 | 0.9956 | 0.0000 | 0.0044 |
| 10 | 0.0027 | 0.9973 | 0.0000 | 0.0000 |
| 11 | 0.0006 | 0.9904 | 0.0000 | 0.0090 |
| 12 | 0.2228 | 0.7729 | 0.0000 | 0.0044 |
| 13 | 0.0015 | 0.3117 | 0.0015 | 0.6854 |
| 14 | 0.0600 | 0.1346 | 0.0208 | 0.7846 |
| 15 | 0.0664 | 0.0632 | 0.0726 | 0.7978 |
| 16 | 0.1679 | 0.1266 | 0.1921 | 0.5134 |
| 17 | 0.1477 | 0.0644 | 0.1766 | 0.6113 |
| 18 | 0.1243 | 0.0964 | 0.5349 | 0.2443 |
TFs using this motif
2 known/direct, 2 nearest-neighbor >70%, 23 nearest-neighbor 50–70%, 0 structure-derived. Showing all 27 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q9Y2Y9 | Known | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-TRAF,zf-met,zf-H2C2_2,zf-C2HC_2,RRN7,Rep_fac-A_C | |
| X5DNR2 | Known | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-TRAF,zf-met,zf-H2C2_2,zf-C2HC_2,RRN7,Rep_fac-A_C | |
| B2RCZ6 | Nearest Neighbor (>70%) | 75.0% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| B7ZAX4 | Nearest Neighbor (>70%) | 75.0% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q59EY3 | Nearest Neighbor (50–70%) | 69.3% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q6BEB4 | Nearest Neighbor (50–70%) | 69.3% | zf-C2H2_4,zf-C2H2,zf-ribbon_3,zinc_ribbon_5,zf-C2H2_jaz,zinc_ribbon_4,zf-met,zf-H2C2_2,GFA |
| B7TQ30 | Nearest Neighbor (50–70%) | 68.9% | zf-C2H2_4,zf-C2H2 |
| B9UZC5 | Nearest Neighbor (50–70%) | 68.9% | zf-C2H2_4,zf-C2H2 |
| A0A494C070 | Nearest Neighbor (50–70%) | 68.1% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| B7ZLN9 | Nearest Neighbor (50–70%) | 68.1% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| H0Y7L6 | Nearest Neighbor (50–70%) | 68.1% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| Q8WWU2 | Nearest Neighbor (50–70%) | 68.1% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q8WWU3 | Nearest Neighbor (50–70%) | 68.1% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| Q59FX5 | Nearest Neighbor (50–70%) | 67.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| B3KXP2 | Nearest Neighbor (50–70%) | 63.8% | zf-C2H2_4,HlyC,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,RRN7,zf-C2H2_6 |
| F2VTX5 | Nearest Neighbor (50–70%) | 63.8% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2 |
| A8K350 | Nearest Neighbor (50–70%) | 62.6% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| Q3SY56 | Nearest Neighbor (50–70%) | 62.6% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,RRN7,zf-C2H2_6 |
| B3KNE6 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| O75840 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| Q4ZG79 | Nearest Neighbor (50–70%) | 61.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| Q4G0T0 | Nearest Neighbor (50–70%) | 61.6% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| V5M1V5 | Nearest Neighbor (50–70%) | 61.6% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| A0A223PZB5 | Nearest Neighbor (50–70%) | 60.4% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| O14889 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,Fer4_17,Ribosomal_L37ae,zf-C2H2,Zn_ribbon_recom,UPF0547,Evr1_Alr,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,Ogr_Delta,XPA_N,zf-met,zf-H2C2_2,Yippee,HypA,C1_1,A2L_zn_ribbon,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,YyzF,Zn_Tnp_IS1595,zf-MYND,DUF35_N,RRN7,zf-C2H2_6,DUF2321,Desulfoferrod_N,C1_2,Fer4_2,FYVE,Prok-RING_1,zf-HIT,COX5B,Tnp_zf-ribbon_2,ZZ,PHD,DUF82,TF_Zn_Ribbon,SprT-like,DZR,DNA_RNApol_7kD,zf-BED,zf-trcl,zinc_ribbon_4,DUF1610,Fer4_4,CxxC_CxxC_SSSS,DUF164,CpXC,FYDLN_acid,Ribosomal_L44 |
| Q32MK9 | Nearest Neighbor (50–70%) | 51.5% | zf-C2H2_4,zf-C2H2,C1_2,zf-C2H2_jaz,zf-met,zf-H2C2_2,GAGA,C1_1,zf-C2H2_6 |
| Q9UFH1 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,C1_1,C1_4,HNH,DUF2256,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,DUF3449,Desulfoferrod_N,C1_2,zf-HIT,ZZ,ADK_lid,DUF1610,CxxC_CxxC_SSSS,CpXC,BolA |