JASPAR motif
MA0733.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2090 | 0.2613 | 0.1798 | 0.3498 |
| 2 | 0.2091 | 0.3045 | 0.0964 | 0.3899 |
| 3 | 0.5514 | 0.3865 | 0.0303 | 0.0317 |
| 4 | 0.0201 | 0.8868 | 0.0298 | 0.0633 |
| 5 | 0.0632 | 0.0540 | 0.8023 | 0.0804 |
| 6 | 0.0024 | 0.9649 | 0.0137 | 0.0191 |
| 7 | 0.0253 | 0.9362 | 0.0225 | 0.0160 |
| 8 | 0.0000 | 0.9481 | 0.0237 | 0.0282 |
| 9 | 0.7182 | 0.1684 | 0.0555 | 0.0579 |
| 10 | 0.0092 | 0.9161 | 0.0237 | 0.0510 |
| 11 | 0.0255 | 0.1961 | 0.7507 | 0.0277 |
| 12 | 0.0021 | 0.9136 | 0.0384 | 0.0459 |
| 13 | 0.6818 | 0.1241 | 0.1227 | 0.0715 |
| 14 | 0.3243 | 0.2636 | 0.0771 | 0.3350 |
| 15 | 0.2593 | 0.1432 | 0.1145 | 0.4830 |
| 16 | 0.2102 | 0.1973 | 0.1650 | 0.4275 |
TFs using this motif
2 known/direct, 4 nearest-neighbor >70%, 24 nearest-neighbor 50–70%, 0 structure-derived. Showing all 30 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A0C4DG96 | Known | zf-C2H2_4,zf-C2H2,zf-BED,zf-met,zf-H2C2_2,zf-C2HC_2,RRN7,zf-C2H2_6 | |
| Q05215 | Known | zf-C2H2_4,zf-C2H2,zf-BED,zf-met,zf-H2C2_2,zf-C2HC_2,RRN7,zf-C2H2_6 | |
| B7ZKU3 | Nearest Neighbor (>70%) | 99.7% | zf-C2H2_4,zf-C2H2,zf-BED,zf-met,zf-H2C2_2,zf-C2HC_2,RRN7,zf-C2H2_6 |
| A0A089VKS7 | Nearest Neighbor (>70%) | 78.8% | zf-C2H2_4,zf-C2H2,C1_2,zf-BED,zf-C2H2_jaz,DUF3432,zf-met,zf-H2C2_2,zf-C2HC_2,zf-UBR,DUF3446,RRN7,zf-C2H2_6 |
| B4DIY6 | Nearest Neighbor (>70%) | 78.6% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,RRN7,zf-C2H2_6 |
| A0A8I5KYI5 | Nearest Neighbor (>70%) | 76.9% | zf-C2H2_4,zf-C2H2,zf-CHCC,zf-BED,zf-C2H2_jaz,zf-H2C2_2,zf-C2HC_2,zf-UBR,DUF3446,RRN7,zf-C2H2_6 |
| H0Y7K5 | Nearest Neighbor (50–70%) | 60.0% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| J3KNN9 | Nearest Neighbor (50–70%) | 60.0% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| A0A0A0MT54 | Nearest Neighbor (50–70%) | 57.9% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| A0A1W2PQQ0 | Nearest Neighbor (50–70%) | 57.9% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| A0A1W2PR07 | Nearest Neighbor (50–70%) | 57.9% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1,zf-C2HC_2 |
| A0A481V744 | Nearest Neighbor (50–70%) | 57.9% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| P19544 | Nearest Neighbor (50–70%) | 57.9% | zf-C2H2_4,zf-C2H2,CAP_N,zf-met,CCAP,zf-H2C2_2,Ofd1_CTDD,WT1 |
| O14889 | Nearest Neighbor (50–70%) | 54.1% | zf-C2H2_4,Fer4_17,Ribosomal_L37ae,zf-C2H2,Zn_ribbon_recom,UPF0547,Evr1_Alr,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,Ogr_Delta,XPA_N,zf-met,zf-H2C2_2,Yippee,HypA,C1_1,A2L_zn_ribbon,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,YyzF,Zn_Tnp_IS1595,zf-MYND,DUF35_N,RRN7,zf-C2H2_6,DUF2321,Desulfoferrod_N,C1_2,Fer4_2,FYVE,Prok-RING_1,zf-HIT,COX5B,Tnp_zf-ribbon_2,ZZ,PHD,DUF82,TF_Zn_Ribbon,SprT-like,DZR,DNA_RNApol_7kD,zf-BED,zf-trcl,zinc_ribbon_4,DUF1610,Fer4_4,CxxC_CxxC_SSSS,DUF164,CpXC,FYDLN_acid,Ribosomal_L44 |
| H9XFB5 | Nearest Neighbor (50–70%) | 53.8% | zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,UPF0547,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,BHD_2,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_1,Rubredoxin,NinG,A2L_zn_ribbon,C1_4,Katanin_con80,TFIIS_C,zinc_ribbon_5,zf-AN1,Ribosomal_L17,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-MYND,DUF35_N,zf-C2H2_6,Desulfoferrod_N,C1_2,Prok-RING_1,DUF2688,zf-HIT,COX5B,ZZ,Siva,Baculo_IE-1,DUF82,PhnJ,zf-BED,DNA_RNApol_7kD,DUF1610,zinc_ribbon_4,CxxC_CxxC_SSSS,PDZ_1,HTH_18,BHD_1,Ribosomal_L44,zf-LYAR,BolA |
| C9JVC3 | Nearest Neighbor (50–70%) | 53.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,HTH_Tnp_ISL3,Zn_Tnp_IS1595,C1_1,zf-C2H2_6 |
| Q2A130 | Nearest Neighbor (50–70%) | 52.4% | zf-H2C2_2,Transposase_22,KRAB |
| A0A994J5C6 | Nearest Neighbor (50–70%) | 52.0% | zf-C2H2_4,CpXC,zf-C2H2,zf-CHCC,Elf1,Di19,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,GAGA,zf-H2C2_5 |
| B3KRH5 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,zf-C2H2,Zn_ribbon_recom,Prok-RING_2,C1_3,zf-C2H2_jaz,YhfH,zf-met,XPA_N,zf-H2C2_2,Yippee,Ring_hydroxyl_B,MBD,A2L_zn_ribbon,C1_4,TFIIS_C,DUF2256,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zf-UBP,Prok-RING_1,ADK_lid,LIM,GATA,DNA_RNApol_7kD,zf-BED,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,CpXC,FYDLN_acid,BolA |
| O14849 | Nearest Neighbor (50–70%) | 51.5% | zf-C2H2_4,zf-H2C2_2,zf-C2H2_6,zf-C2H2 |
| H0YED9 | Nearest Neighbor (50–70%) | 51.1% | zf-C2H2_4,zf-C2H2,zinc_ribbon_4,zf-met,CCAP,zf-H2C2_2,zf-C2HC_2,WT1 |
| A8K2N2 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,C1_4,zf-C2H2,OGG_N,DUF2688,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Yippee,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,CpXC,zf-C2H2_6,GATA,Csm1 |
| B4DHH6 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,DUF3449,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| B4DWR6 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,YhfH,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_1,MBD,C1_4,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF3280,Prok-RING_1,LIM,GATA,zf-BED,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,CpXC,BolA |
| H3BSM9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,DUF2225,zf-LITAF-like,Elf1,zf-C2H2,DUF3449,Prok-RING_1,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,C1_1,zf-C2H2_6,BolA |
| H7C1K8 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,DUF1610,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,DUF1340,zf-C2H2_6 |
| M0QY11 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,C1_4,zf-C2H2,OGG_N,DUF2688,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Yippee,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,BolA,CpXC,zf-C2H2_6,Csm1 |
| Q6ZNA0 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Zn_ribbon_recom,C1_3,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,Yippee,C1_4,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,zf-HIT,DZR,LIM,zf-BED,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,CpXC,FYDLN_acid |
| Q9NSC2 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,DUF3449,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |
| V9HVY5 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,DUF3449,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6,BolA |