JASPAR motif
MA0779.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0601 | 0.6047 | 0.2726 | 0.0626 |
| 2 | 0.0006 | 0.0000 | 0.9847 | 0.0148 |
| 3 | 0.0497 | 0.0170 | 0.0000 | 0.9333 |
| 4 | 0.0006 | 0.9036 | 0.0002 | 0.0956 |
| 5 | 0.9433 | 0.0562 | 0.0005 | 0.0000 |
| 6 | 0.0004 | 0.8730 | 0.0000 | 0.1266 |
| 7 | 0.0006 | 0.0004 | 0.9985 | 0.0006 |
| 8 | 0.0000 | 0.8124 | 0.1876 | 0.0000 |
| 9 | 0.5726 | 0.0209 | 0.0111 | 0.3953 |
| 10 | 0.0023 | 0.0899 | 0.0004 | 0.9074 |
| 11 | 0.0002 | 0.2732 | 0.7183 | 0.0083 |
| 12 | 0.8570 | 0.0005 | 0.1425 | 0.0000 |
| 13 | 0.1861 | 0.3680 | 0.2778 | 0.1681 |
| 14 | 0.0151 | 0.1248 | 0.0065 | 0.8536 |
| 15 | 0.1408 | 0.0018 | 0.7114 | 0.1460 |
| 16 | 0.2815 | 0.4962 | 0.2222 | 0.0000 |
| 17 | 0.3859 | 0.3119 | 0.1139 | 0.1883 |
TFs using this motif
2 known/direct, 11 nearest-neighbor >70%, 18 nearest-neighbor 50–70%, 0 structure-derived. Showing all 31 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A087WXV5 | Known | HTH_23,PAX,HTH_32,HTH_29 | |
| P15863 | Known | HTH_23,PAX,HTH_32,HTH_29 | |
| A0A1P8LI09 | Nearest Neighbor (>70%) | 95.0% | MarR_2,HTH_29,HTH_28,HTH_32,HTH_23,PAX |
| C7FNH7 | Nearest Neighbor (>70%) | 79.7% | HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_23,PAX |
| A0A0S2Z4P2 | Nearest Neighbor (>70%) | 76.3% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,HTH_23,PAX |
| A0AAQ5BGK0 | Nearest Neighbor (>70%) | 73.8% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A7P0T907 | Nearest Neighbor (>70%) | 72.4% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| Q06710 | Nearest Neighbor (>70%) | 72.4% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| R9W7C9 | Nearest Neighbor (>70%) | 72.4% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (>70%) | 71.2% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| Q56H36 | Nearest Neighbor (>70%) | 70.5% | HTH_Tnp_IS1,HTH_5,Fe_dep_repress,HTH_29,HTH_23,PAX |
| G3V5S4 | Nearest Neighbor (>70%) | 70.3% | HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| Q6YFJ8 | Nearest Neighbor (>70%) | 70.3% | HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 69.7% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| B3KQG1 | Nearest Neighbor (50–70%) | 69.7% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A9L9PYK3 | Nearest Neighbor (50–70%) | 69.2% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| Q5SZP1 | Nearest Neighbor (50–70%) | 69.2% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| A0A7P0TAC9 | Nearest Neighbor (50–70%) | 67.8% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| A0A0A0MRH7 | Nearest Neighbor (50–70%) | 67.3% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| E7EQT0 | Nearest Neighbor (50–70%) | 67.1% | HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,Homeobox,HTH_32,HTH_23,PAX |
| B2R940 | Nearest Neighbor (50–70%) | 63.2% | HTH_29,HTH_28,HTH_32,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 62.9% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PQW3 | Nearest Neighbor (50–70%) | 62.0% | PAX,HTH_Tnp_IS1,HTH_32 |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 61.3% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| Q3KNR4 | Nearest Neighbor (50–70%) | 56.0% | Homeobox_KN,Homeobox,PAX |
| E7ES87 | Nearest Neighbor (50–70%) | 55.5% | Homeobox,Pax2_C,PAX |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 54.2% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 54.2% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 54.2% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 54.2% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 54.2% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |