JASPAR motif

MA0879.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 10 positions

Position	A	C	G	T
1	0.2564	0.3411	0.2191	0.1834
2	0.3120	0.3375	0.1922	0.1583
3	0.2140	0.2567	0.0139	0.5154
4	0.8360	0.0869	0.0420	0.0350
5	0.9239	0.0117	0.0047	0.0597
6	0.1069	0.0044	0.0052	0.8835
7	0.0169	0.0386	0.0549	0.8897
8	0.8016	0.0100	0.0035	0.1849
9	0.2142	0.2287	0.2508	0.3062
10	0.1948	0.3775	0.2286	0.1990

TFs using this motif 20 linked TF records

2 known/direct, 0 nearest-neighbor >70%, 18 nearest-neighbor 50–70%, 0 structure-derived. Showing all 20 assignments.

TF record	Motif assignment	Identity	PFAM Families
A0AAG2UW58	Known		Homeobox,Homeobox_KN,Homez
F8VXJ2	Known		Homeobox,Homeobox_KN,Homez
Q13028	Nearest Neighbor (50–70%)	67.6%	Homeobox,Homeobox_KN,Homez
A6NCS4	Nearest Neighbor (50–70%)	59.6%	Homeobox,Homez
A1ECD1	Nearest Neighbor (50–70%)	58.6%	Homeobox,Homez
A0A165EY39	Nearest Neighbor (50–70%)	57.8%	Homeobox,Homez
A0A2R4LFK0	Nearest Neighbor (50–70%)	57.8%	Homeobox,Homez
A1ECB6	Nearest Neighbor (50–70%)	57.8%	Homeobox,Homez
Q15270	Nearest Neighbor (50–70%)	56.1%	Homeobox
Q9UD57	Nearest Neighbor (50–70%)	56.1%	Homeobox
Q9H2Z4	Nearest Neighbor (50–70%)	54.3%	Homeobox
Q9UDY3	Nearest Neighbor (50–70%)	54.2%	Homeobox,DUF1183,QLQ,MRP-S27
Q14548	Nearest Neighbor (50–70%)	53.8%	Homeobox
B7ZMC8	Nearest Neighbor (50–70%)	53.3%	SAGA-Tad1,Homeobox
A8K4D1	Nearest Neighbor (50–70%)	51.7%	Homeobox,Homez
Q6NSW7	Nearest Neighbor (50–70%)	51.7%	Homeobox,Homez
Q8N7R0	Nearest Neighbor (50–70%)	51.7%	Homeobox,DndB,Homez
R9W9B1	Nearest Neighbor (50–70%)	51.7%	Homez,Homeobox,bZIP_C,Homeobox_KN,Pro-kuma_activ
O43711	Nearest Neighbor (50–70%)	50.8%	Tubulin_2,Homeobox,Homez
Q9NP08	Nearest Neighbor (50–70%)	50.0%	Homeobox,Nha1_C