CisBP motif
M04835_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2911 | 0.1909 | 0.2287 | 0.2892 |
| 2 | 0.2604 | 0.3453 | 0.1774 | 0.2170 |
| 3 | 0.0545 | 0.0430 | 0.8760 | 0.0264 |
| 4 | 0.0489 | 0.8360 | 0.0252 | 0.0899 |
| 5 | 0.1693 | 0.0304 | 0.7011 | 0.0992 |
| 6 | 0.0809 | 0.0896 | 0.0636 | 0.7659 |
| 7 | 0.0970 | 0.5612 | 0.2299 | 0.1119 |
| 8 | 0.2434 | 0.2283 | 0.3642 | 0.1642 |
| 9 | 0.2057 | 0.2679 | 0.1868 | 0.3396 |
| 10 | 0.2623 | 0.2189 | 0.2226 | 0.2962 |
| 11 | 0.3340 | 0.1925 | 0.2698 | 0.2038 |
| 12 | 0.1472 | 0.3245 | 0.2415 | 0.2868 |
| 13 | 0.1154 | 0.2130 | 0.5710 | 0.1006 |
| 14 | 0.7444 | 0.0702 | 0.1152 | 0.0702 |
| 15 | 0.0867 | 0.7182 | 0.0298 | 0.1653 |
| 16 | 0.0688 | 0.0328 | 0.8281 | 0.0703 |
| 17 | 0.0430 | 0.8775 | 0.0315 | 0.0480 |
| 18 | 0.2415 | 0.2000 | 0.3283 | 0.2302 |
| 19 | 0.2561 | 0.2335 | 0.2109 | 0.2994 |
TFs using this motif
3 known/direct, 1 nearest-neighbor >70%, 24 nearest-neighbor 50–70%, 0 structure-derived. Showing all 28 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| C9JTA7 | Known | Fork_head | |
| P32314 | Known | Fork_head | |
| Q6IS90 | Known | Fork_head | |
| H0YJ94 | Nearest Neighbor (>70%) | 75.4% | Fork_head |
| S4R3U5 | Nearest Neighbor (50–70%) | 68.0% | Fork_head |
| O15353 | Nearest Neighbor (50–70%) | 61.2% | Fork_head |
| A6H901 | Nearest Neighbor (50–70%) | 60.7% | Fork_head |
| Q96NZ1 | Nearest Neighbor (50–70%) | 60.7% | Fork_head |
| A0A0B5INR4 | Nearest Neighbor (50–70%) | 58.8% | Fork_head |
| A0A0B5INR8 | Nearest Neighbor (50–70%) | 58.3% | Fork_head |
| A0A0B5J4B6 | Nearest Neighbor (50–70%) | 58.3% | Fork_head |
| A0A0B5INR0 | Nearest Neighbor (50–70%) | 58.0% | Fork_head |
| A0A0B5J129 | Nearest Neighbor (50–70%) | 57.5% | Fork_head |
| A0A0B5J124 | Nearest Neighbor (50–70%) | 57.1% | Fork_head |
| A0A0B5ISY2 | Nearest Neighbor (50–70%) | 56.2% | Fork_head |
| A0A0B5IYA5 | Nearest Neighbor (50–70%) | 56.2% | Fork_head |
| A0A0B5ISY9 | Nearest Neighbor (50–70%) | 55.1% | Fork_head |
| Q12946 | Nearest Neighbor (50–70%) | 53.7% | Fork_head |
| H0YJ54 | Nearest Neighbor (50–70%) | 52.6% | Fork_head |
| B4DWN5 | Nearest Neighbor (50–70%) | 52.4% | DndB,Fork_head,HNF_C,Fork_head_N |
| B4E257 | Nearest Neighbor (50–70%) | 52.4% | HNF_C,Fork_head,Fork_head_N |
| C6KMR8 | Nearest Neighbor (50–70%) | 51.8% | Fork_head |
| A0AAU7P1G8 | Nearest Neighbor (50–70%) | 50.6% | Fork_head |
| A8K811 | Nearest Neighbor (50–70%) | 50.0% | Fork_head |
| E0XEY9 | Nearest Neighbor (50–70%) | 50.0% | Fork_head |
| Q12950 | Nearest Neighbor (50–70%) | 50.0% | Fork_head,Gly-zipper_OmpA |
| Q3MI95 | Nearest Neighbor (50–70%) | 50.0% | Fork_head |
| Q9NU39 | Nearest Neighbor (50–70%) | 50.0% | Fork_head |