JASPAR motif
MA0717.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1373 | 0.4069 | 0.1814 | 0.2745 |
| 2 | 0.0807 | 0.4454 | 0.0383 | 0.4357 |
| 3 | 0.7958 | 0.0627 | 0.0920 | 0.0496 |
| 4 | 0.9215 | 0.0361 | 0.0180 | 0.0244 |
| 5 | 0.0068 | 0.0185 | 0.0031 | 0.9717 |
| 6 | 0.0454 | 0.0886 | 0.0526 | 0.8134 |
| 7 | 0.8425 | 0.0573 | 0.0078 | 0.0923 |
| 8 | 0.3451 | 0.1927 | 0.3181 | 0.1441 |
TFs using this motif
1 known/direct, 0 nearest-neighbor >70%, 29 nearest-neighbor 50–70%, 0 structure-derived. Showing all 30 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q96IS3 | Known | Homeobox,OAR | |
| W5S2M5 | Nearest Neighbor (50–70%) | 66.6% | Pax7,Homeobox_KN,Homeobox |
| A0AAQ5BGK0 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| Q12777 | Nearest Neighbor (50–70%) | 65.0% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 64.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 64.6% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 64.6% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 64.6% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 64.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 64.6% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 64.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 64.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 64.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 64.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 64.6% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A087WVB7 | Nearest Neighbor (50–70%) | 61.9% | MRP-L20,Homeobox,Homeobox_KN |
| A0A455R6J4 | Nearest Neighbor (50–70%) | 61.0% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| A0A5F9ZHY1 | Nearest Neighbor (50–70%) | 58.2% | Homeobox |
| B1B1S6 | Nearest Neighbor (50–70%) | 58.1% | Homeobox,HA,Homeobox_KN |
| Q9HB31 | Nearest Neighbor (50–70%) | 58.1% | Homeobox,Nairo_nucleo,P12 |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 56.2% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D6RBG8 | Nearest Neighbor (50–70%) | 56.2% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| A0A2R8Y683 | Nearest Neighbor (50–70%) | 52.9% | Homeobox,Homeobox_KN |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 51.7% | WWbp,Homeobox,Homeobox_KN |
| Q96PT4 | Nearest Neighbor (50–70%) | 51.5% | CENP-B_N,HTH_3,Homeobox,Tautomerase,HTH_26,Homeobox_KN |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 51.4% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 51.4% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT3 | Nearest Neighbor (50–70%) | 51.4% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q15270 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |
| Q9UD57 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |