CisBP motif
M03250_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2783 | 0.2335 | 0.1290 | 0.3592 |
| 2 | 0.0431 | 0.0407 | 0.0000 | 0.9162 |
| 3 | 0.8501 | 0.0486 | 0.0646 | 0.0366 |
| 4 | 0.9912 | 0.0011 | 0.0077 | 0.0000 |
| 5 | 0.0000 | 0.0292 | 0.1128 | 0.8580 |
| 6 | 0.0567 | 0.8787 | 0.0411 | 0.0235 |
| 7 | 0.0248 | 0.7106 | 0.0774 | 0.1873 |
| 8 | 0.1356 | 0.2242 | 0.3543 | 0.2858 |
TFs using this motif
0 known/direct, 1 nearest-neighbor >70%, 31 nearest-neighbor 50–70%, 0 structure-derived. Showing all 32 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A5F9ZHY1 | Nearest Neighbor (>70%) | 81.2% | Homeobox |
| A0A455R6J4 | Nearest Neighbor (50–70%) | 69.3% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| A0A087WVB7 | Nearest Neighbor (50–70%) | 63.9% | MRP-L20,Homeobox,Homeobox_KN |
| A6NLG4 | Nearest Neighbor (50–70%) | 63.9% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| O60902 | Nearest Neighbor (50–70%) | 63.9% | MRP-L20,Homeobox,OAR,Sporozoite_P67,Homeobox_KN |
| A0AAQ5BGK0 | Nearest Neighbor (50–70%) | 62.2% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| Q12777 | Nearest Neighbor (50–70%) | 61.2% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| Q6IT45 | Nearest Neighbor (50–70%) | 60.9% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| W5S2M5 | Nearest Neighbor (50–70%) | 60.5% | Pax7,Homeobox_KN,Homeobox |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 56.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 56.4% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 56.4% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 56.4% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 56.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 56.4% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 56.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 56.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 56.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 56.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 56.4% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 56.0% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D6RBG8 | Nearest Neighbor (50–70%) | 56.0% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| B1B1S6 | Nearest Neighbor (50–70%) | 54.5% | Homeobox,HA,Homeobox_KN |
| A0A8V8TM49 | Nearest Neighbor (50–70%) | 53.4% | Homeobox,Homeobox_KN |
| A0A8V8TMK4 | Nearest Neighbor (50–70%) | 53.4% | Homeobox,Homeobox_KN |
| D2CFI5 | Nearest Neighbor (50–70%) | 53.4% | Homeobox,Homeobox_KN |
| P0DV77 | Nearest Neighbor (50–70%) | 53.4% | Homeobox,Homeobox_KN |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 53.2% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 53.2% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT3 | Nearest Neighbor (50–70%) | 53.2% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 52.3% | WWbp,Homeobox,Homeobox_KN |
| Q17RH7 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Terminase_5,Homeobox_KN,Nucleo_P87 |