CisBP motif
M05042_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1376 | 0.2629 | 0.4381 | 0.1614 |
| 2 | 0.1925 | 0.1657 | 0.2129 | 0.4289 |
| 3 | 0.0472 | 0.3620 | 0.2432 | 0.3476 |
| 4 | 0.7790 | 0.0020 | 0.1989 | 0.0202 |
| 5 | 0.9806 | 0.0035 | 0.0159 | 0.0000 |
| 6 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 7 | 0.0780 | 0.0000 | 0.0070 | 0.9150 |
| 8 | 0.0938 | 0.0000 | 0.9062 | 0.0000 |
| 9 | 0.0483 | 0.2812 | 0.4826 | 0.1879 |
| 10 | 0.1681 | 0.2397 | 0.2544 | 0.3377 |
TFs using this motif
1 known/direct, 6 nearest-neighbor >70%, 16 nearest-neighbor 50–70%, 0 structure-derived. Showing all 23 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q8TAU0 | Known | Homeobox | |
| A0A165EY39 | Nearest Neighbor (>70%) | 80.0% | Homeobox,Homez |
| A1ECB6 | Nearest Neighbor (>70%) | 75.2% | Homeobox,Homez |
| Q9H2Z4 | Nearest Neighbor (>70%) | 72.7% | Homeobox |
| A1ECD1 | Nearest Neighbor (>70%) | 72.5% | Homeobox,Homez |
| A0A2R4LFK0 | Nearest Neighbor (>70%) | 71.7% | Homeobox,Homez |
| Q13028 | Nearest Neighbor (>70%) | 70.5% | Homeobox,Homeobox_KN,Homez |
| Q15270 | Nearest Neighbor (50–70%) | 58.6% | Homeobox |
| O43711 | Nearest Neighbor (50–70%) | 58.0% | Tubulin_2,Homeobox,Homez |
| Q9UD57 | Nearest Neighbor (50–70%) | 56.8% | Homeobox |
| Q9UDY3 | Nearest Neighbor (50–70%) | 56.4% | Homeobox,DUF1183,QLQ,MRP-S27 |
| Q14548 | Nearest Neighbor (50–70%) | 54.7% | Homeobox |
| B7ZMC8 | Nearest Neighbor (50–70%) | 54.2% | SAGA-Tad1,Homeobox |
| Q9NP08 | Nearest Neighbor (50–70%) | 53.3% | Homeobox,Nha1_C |
| Q03014 | Nearest Neighbor (50–70%) | 52.4% | Homeobox,ArsC,Homeobox_KN,Homez |
| A0A090N7W7 | Nearest Neighbor (50–70%) | 52.3% | Homeobox,Upf2 |
| Q16124 | Nearest Neighbor (50–70%) | 51.3% | Homeobox,DUF2209 |
| O60863 | Nearest Neighbor (50–70%) | 51.1% | Homeobox,Terminase_5,Homeobox_KN,Homez |
| Q6ZNG2 | Nearest Neighbor (50–70%) | 50.9% | Homeobox,DUF2986 |
| B3KXT6 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,CDC45,Paf1 |
| F8VWZ5 | Nearest Neighbor (50–70%) | 50.8% | ArsC,CDC45,Homeobox,Homeobox_KN,Paf1 |
| Q14774 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,CDC45,Paf1 |
| A6NCS4 | Nearest Neighbor (50–70%) | 50.5% | Homeobox,Homez |