JASPAR motif
MA0853.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1584 | 0.5842 | 0.1485 | 0.1089 |
| 2 | 0.1000 | 0.2400 | 0.5600 | 0.1000 |
| 3 | 0.1900 | 0.4400 | 0.1600 | 0.2100 |
| 4 | 0.4000 | 0.1500 | 0.2900 | 0.1600 |
| 5 | 0.0202 | 0.3434 | 0.0101 | 0.6263 |
| 6 | 0.0099 | 0.0792 | 0.0000 | 0.9109 |
| 7 | 0.9802 | 0.0099 | 0.0099 | 0.0000 |
| 8 | 0.9800 | 0.0000 | 0.0100 | 0.0100 |
| 9 | 0.0100 | 0.0100 | 0.0000 | 0.9800 |
| 10 | 0.0000 | 0.0099 | 0.0099 | 0.9802 |
| 11 | 0.9109 | 0.0000 | 0.0792 | 0.0099 |
| 12 | 0.6263 | 0.0101 | 0.3434 | 0.0202 |
| 13 | 0.1700 | 0.2300 | 0.1800 | 0.4200 |
| 14 | 0.2900 | 0.2800 | 0.1300 | 0.3000 |
| 15 | 0.3600 | 0.2300 | 0.1900 | 0.2200 |
| 16 | 0.2300 | 0.2900 | 0.2500 | 0.2300 |
| 17 | 0.1200 | 0.4300 | 0.2100 | 0.2400 |
TFs using this motif
0 known/direct, 4 nearest-neighbor >70%, 32 nearest-neighbor 50–70%, 0 structure-derived. Showing all 36 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0AAQ5BGK0 | Nearest Neighbor (>70%) | 75.0% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A455R6J4 | Nearest Neighbor (>70%) | 74.1% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| Q12777 | Nearest Neighbor (>70%) | 72.1% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| W5S2M5 | Nearest Neighbor (>70%) | 71.7% | Pax7,Homeobox_KN,Homeobox |
| B1B1S6 | Nearest Neighbor (50–70%) | 67.6% | Homeobox,HA,Homeobox_KN |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 66.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 66.6% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 66.6% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 66.6% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 66.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 66.6% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 66.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 66.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 66.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 66.6% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 66.6% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 63.9% | WWbp,Homeobox,Homeobox_KN |
| Q6IT45 | Nearest Neighbor (50–70%) | 63.9% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| A0A087WVB7 | Nearest Neighbor (50–70%) | 61.7% | MRP-L20,Homeobox,Homeobox_KN |
| A6NLG4 | Nearest Neighbor (50–70%) | 61.7% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| O60902 | Nearest Neighbor (50–70%) | 61.7% | MRP-L20,Homeobox,OAR,Sporozoite_P67,Homeobox_KN |
| A0A5F9ZHY1 | Nearest Neighbor (50–70%) | 60.3% | Homeobox |
| A0A2R8Y683 | Nearest Neighbor (50–70%) | 58.8% | Homeobox,Homeobox_KN |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 58.4% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D6RBG8 | Nearest Neighbor (50–70%) | 58.4% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| Q3KNR4 | Nearest Neighbor (50–70%) | 55.5% | Homeobox_KN,Homeobox,PAX |
| A0A090N7W7 | Nearest Neighbor (50–70%) | 53.3% | Homeobox,Upf2 |
| A0A2R8Y4G1 | Nearest Neighbor (50–70%) | 53.2% | Homeobox,Homeobox_KN |
| A0A2R8Y8C8 | Nearest Neighbor (50–70%) | 53.2% | Homeobox,Homeobox_KN |
| Q9UD57 | Nearest Neighbor (50–70%) | 51.5% | Homeobox |
| Q15270 | Nearest Neighbor (50–70%) | 50.7% | Homeobox |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT3 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT4 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,HTH_3,Homeobox,Tautomerase,HTH_26,Homeobox_KN |
| Q9UDY3 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,DUF1183,QLQ,MRP-S27 |