JASPAR motif
MA0883.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3400 | 0.1300 | 0.1200 | 0.4100 |
| 2 | 0.2800 | 0.0800 | 0.3700 | 0.2700 |
| 3 | 0.4900 | 0.0800 | 0.3100 | 0.1200 |
| 4 | 0.4900 | 0.0800 | 0.1300 | 0.3000 |
| 5 | 0.2500 | 0.3600 | 0.1800 | 0.2100 |
| 6 | 0.2772 | 0.4950 | 0.1980 | 0.0297 |
| 7 | 0.0600 | 0.0100 | 0.9300 | 0.0000 |
| 8 | 0.0000 | 0.0100 | 0.9900 | 0.0000 |
| 9 | 0.9400 | 0.0600 | 0.0000 | 0.0000 |
| 10 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 11 | 0.0100 | 0.0100 | 0.0000 | 0.9800 |
| 12 | 0.9700 | 0.0000 | 0.0000 | 0.0300 |
| 13 | 0.4000 | 0.0500 | 0.3500 | 0.2000 |
| 14 | 0.0909 | 0.1111 | 0.3737 | 0.4242 |
| 15 | 0.1500 | 0.2800 | 0.3000 | 0.2700 |
| 16 | 0.3030 | 0.2020 | 0.1919 | 0.3030 |
| 17 | 0.3700 | 0.1200 | 0.1500 | 0.3600 |
TFs using this motif
0 known/direct, 1 nearest-neighbor >70%, 33 nearest-neighbor 50–70%, 0 structure-derived. Showing all 34 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0AAQ5BGK0 | Nearest Neighbor (>70%) | 70.4% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| Q12777 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| A0A455R6J4 | Nearest Neighbor (50–70%) | 65.0% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 63.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 63.4% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 63.4% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 63.4% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 63.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 63.4% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 63.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 63.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 63.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 63.4% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 63.4% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A5F9ZHY1 | Nearest Neighbor (50–70%) | 62.6% | Homeobox |
| A0A087WVB7 | Nearest Neighbor (50–70%) | 62.1% | MRP-L20,Homeobox,Homeobox_KN |
| A6NLG4 | Nearest Neighbor (50–70%) | 62.1% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| O60902 | Nearest Neighbor (50–70%) | 62.1% | MRP-L20,Homeobox,OAR,Sporozoite_P67,Homeobox_KN |
| W5S2M5 | Nearest Neighbor (50–70%) | 61.5% | Pax7,Homeobox_KN,Homeobox |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 60.5% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D6RBG8 | Nearest Neighbor (50–70%) | 60.5% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 59.6% | WWbp,Homeobox,Homeobox_KN |
| Q6IT45 | Nearest Neighbor (50–70%) | 59.0% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| B1B1S6 | Nearest Neighbor (50–70%) | 58.7% | Homeobox,HA,Homeobox_KN |
| Q3KNR4 | Nearest Neighbor (50–70%) | 55.9% | Homeobox_KN,Homeobox,PAX |
| P0C7M4 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,GRP |
| Q9UD57 | Nearest Neighbor (50–70%) | 50.8% | Homeobox |
| A0A2R8Y683 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,Homeobox_KN |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q15270 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |
| Q17RH7 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,Terminase_5,Homeobox_KN,Nucleo_P87 |
| Q96PT3 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT4 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,HTH_3,Homeobox,Tautomerase,HTH_26,Homeobox_KN |