JASPAR motif
MA1107.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3069 | 0.2032 | 0.3288 | 0.1611 |
| 2 | 0.1655 | 0.2518 | 0.4948 | 0.0879 |
| 3 | 0.2157 | 0.6754 | 0.0615 | 0.0474 |
| 4 | 0.0042 | 0.9835 | 0.0068 | 0.0056 |
| 5 | 0.9373 | 0.0426 | 0.0125 | 0.0076 |
| 6 | 0.0042 | 0.9772 | 0.0137 | 0.0049 |
| 7 | 0.8019 | 0.0205 | 0.1571 | 0.0205 |
| 8 | 0.0071 | 0.9612 | 0.0215 | 0.0101 |
| 9 | 0.0799 | 0.8879 | 0.0169 | 0.0153 |
| 10 | 0.0096 | 0.9600 | 0.0092 | 0.0212 |
| 11 | 0.6121 | 0.2384 | 0.0582 | 0.0912 |
| 12 | 0.0820 | 0.5711 | 0.1710 | 0.1759 |
| 13 | 0.2101 | 0.3823 | 0.1502 | 0.2574 |
TFs using this motif
1 known/direct, 4 nearest-neighbor >70%, 25 nearest-neighbor 50–70%, 0 structure-derived. Showing all 30 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q13886 | Known | zf-C2H2_4,zf-C2H2,zf-BED,IBR,zf-TRAF,Rad50_zn_hook,zf-met,zf-H2C2_2 | |
| B5BUG8 | Nearest Neighbor (>70%) | 99.5% | zf-C2H2_4,zf-C2H2,zf-BED,IBR,zf-met,Rad50_zn_hook,zf-H2C2_2 |
| B2RCZ6 | Nearest Neighbor (>70%) | 72.8% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| B7ZAX4 | Nearest Neighbor (>70%) | 72.8% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| A8K350 | Nearest Neighbor (>70%) | 71.0% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| Q4G0T0 | Nearest Neighbor (50–70%) | 69.8% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| B7TQ30 | Nearest Neighbor (50–70%) | 69.2% | zf-C2H2_4,zf-C2H2 |
| B9UZC5 | Nearest Neighbor (50–70%) | 69.2% | zf-C2H2_4,zf-C2H2 |
| A0A494C070 | Nearest Neighbor (50–70%) | 67.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| B7ZLN9 | Nearest Neighbor (50–70%) | 67.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| H0Y7L6 | Nearest Neighbor (50–70%) | 67.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| Q8WWU2 | Nearest Neighbor (50–70%) | 67.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q8WWU3 | Nearest Neighbor (50–70%) | 67.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| Q59EY3 | Nearest Neighbor (50–70%) | 67.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q59FX5 | Nearest Neighbor (50–70%) | 66.2% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| B2R8P9 | Nearest Neighbor (50–70%) | 65.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| Q6BEB4 | Nearest Neighbor (50–70%) | 64.5% | zf-C2H2_4,zf-C2H2,zf-ribbon_3,zinc_ribbon_5,zf-C2H2_jaz,zinc_ribbon_4,zf-met,zf-H2C2_2,GFA |
| V5M1V5 | Nearest Neighbor (50–70%) | 63.8% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| A0A223PZB5 | Nearest Neighbor (50–70%) | 62.6% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| F2VTX5 | Nearest Neighbor (50–70%) | 61.4% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2 |
| B3KXP2 | Nearest Neighbor (50–70%) | 60.2% | zf-C2H2_4,HlyC,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,RRN7,zf-C2H2_6 |
| Q3SY56 | Nearest Neighbor (50–70%) | 60.2% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,RRN7,zf-C2H2_6 |
| A0A089VKS7 | Nearest Neighbor (50–70%) | 57.8% | zf-C2H2_4,zf-C2H2,C1_2,zf-BED,zf-C2H2_jaz,DUF3432,zf-met,zf-H2C2_2,zf-C2HC_2,zf-UBR,DUF3446,RRN7,zf-C2H2_6 |
| Q9UFH1 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,C1_1,C1_4,HNH,DUF2256,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,DUF3449,Desulfoferrod_N,C1_2,zf-HIT,ZZ,ADK_lid,DUF1610,CxxC_CxxC_SSSS,CpXC,BolA |
| B3KNE6 | Nearest Neighbor (50–70%) | 56.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| O75840 | Nearest Neighbor (50–70%) | 56.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| Q4ZG79 | Nearest Neighbor (50–70%) | 56.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| B4DX96 | Nearest Neighbor (50–70%) | 53.3% | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,SCAN,zf-BED,DNA_RNApol_7kD,zf-C2H2_jaz,zf-trcl,zf-AN1,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,HTH_18,Zn_Tnp_IS1595,zf-C2H2_6 |
| B3KNB1 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,C1_4,TFIIS_C,Raffinose_syn,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF3280,Ham1p_like,GATA,zf-BED,zf-trcl,CxxC_CxxC_SSSS,zf-LYAR |
| Q8N506 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Prok-RING_2,YhfH,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,Yippee,HypA,C1_1,A2L_zn_ribbon,C1_4,zf-RING_3,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,zf-UBP,FYVE,zf-CSL,zf-HIT,Rpr2,zf-BED,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,HTH_18,FYDLN_acid,Ribosomal_L44,BolA |