JASPAR motif
MA0713.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1411 | 0.0809 | 0.0324 | 0.7456 |
| 2 | 0.8053 | 0.0158 | 0.1084 | 0.0705 |
| 3 | 0.9966 | 0.0000 | 0.0030 | 0.0004 |
| 4 | 0.0763 | 0.2479 | 0.0352 | 0.6406 |
| 5 | 0.0445 | 0.3690 | 0.1600 | 0.4265 |
| 6 | 0.0935 | 0.3392 | 0.0597 | 0.5077 |
| 7 | 0.7894 | 0.0495 | 0.1309 | 0.0302 |
| 8 | 0.9470 | 0.0165 | 0.0256 | 0.0109 |
| 9 | 0.0000 | 0.0009 | 0.0002 | 0.9990 |
| 10 | 0.0845 | 0.0579 | 0.0060 | 0.8515 |
| 11 | 0.8089 | 0.0162 | 0.0577 | 0.1172 |
TFs using this motif
1 known/direct, 7 nearest-neighbor >70%, 30 nearest-neighbor 50–70%, 0 structure-derived. Showing all 38 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| O14813 | Known | MRP-L20,Homeobox | |
| W5S2M5 | Nearest Neighbor (>70%) | 81.0% | Pax7,Homeobox_KN,Homeobox |
| Q12777 | Nearest Neighbor (>70%) | 76.1% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| A0AAQ5BGK0 | Nearest Neighbor (>70%) | 73.8% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A5F9ZHY1 | Nearest Neighbor (>70%) | 72.1% | Homeobox |
| A0A087WVB7 | Nearest Neighbor (>70%) | 71.4% | MRP-L20,Homeobox,Homeobox_KN |
| A6NLG4 | Nearest Neighbor (>70%) | 71.4% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| O60902 | Nearest Neighbor (>70%) | 71.4% | MRP-L20,Homeobox,OAR,Sporozoite_P67,Homeobox_KN |
| Q6IT45 | Nearest Neighbor (50–70%) | 69.8% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| A0A455R6J4 | Nearest Neighbor (50–70%) | 68.2% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 64.0% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D6RBG8 | Nearest Neighbor (50–70%) | 64.0% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 62.2% | WWbp,Homeobox,Homeobox_KN |
| B1B1S6 | Nearest Neighbor (50–70%) | 60.9% | Homeobox,HA,Homeobox_KN |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 59.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 59.7% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 59.7% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 59.7% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 59.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 59.7% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 59.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 59.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 59.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 59.7% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 59.7% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| Q14548 | Nearest Neighbor (50–70%) | 58.6% | Homeobox |
| Q13028 | Nearest Neighbor (50–70%) | 56.5% | Homeobox,Homeobox_KN,Homez |
| A0A2R8Y683 | Nearest Neighbor (50–70%) | 56.0% | Homeobox,Homeobox_KN |
| Q9HB31 | Nearest Neighbor (50–70%) | 55.7% | Homeobox,Nairo_nucleo,P12 |
| C0KTE2 | Nearest Neighbor (50–70%) | 53.8% | Homeobox,Pax2_C,DUF765 |
| A0A2R8Y4G1 | Nearest Neighbor (50–70%) | 51.6% | Homeobox,Homeobox_KN |
| A0A2R8Y8C8 | Nearest Neighbor (50–70%) | 51.6% | Homeobox,Homeobox_KN |
| Q9UD57 | Nearest Neighbor (50–70%) | 51.6% | Homeobox |
| Q17RH7 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Terminase_5,Homeobox_KN,Nucleo_P87 |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT3 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT4 | Nearest Neighbor (50–70%) | 50.0% | CENP-B_N,HTH_3,Homeobox,Tautomerase,HTH_26,Homeobox_KN |