JASPAR motif
MA0077.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0395 | 0.7237 | 0.1184 | 0.1184 |
| 2 | 0.1053 | 0.5000 | 0.0789 | 0.3158 |
| 3 | 0.9342 | 0.0132 | 0.0000 | 0.0526 |
| 4 | 0.0263 | 0.0132 | 0.0263 | 0.9342 |
| 5 | 0.0921 | 0.0000 | 0.0526 | 0.8553 |
| 6 | 0.0263 | 0.0263 | 0.9474 | 0.0000 |
| 7 | 0.1711 | 0.0000 | 0.0526 | 0.7763 |
| 8 | 0.1184 | 0.0921 | 0.0789 | 0.7105 |
| 9 | 0.1842 | 0.4079 | 0.0921 | 0.3158 |
TFs using this motif
4 known/direct, 5 nearest-neighbor >70%, 73 nearest-neighbor 50–70%, 0 structure-derived. Showing all 82 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A0U4U3E8 | Known | CytochromB561_N | |
| P48436 | Known | SOX-related factors{4.1.1} | |
| S6CBB2 | Known | ||
| U5XJZ4 | Known | HMG_box | |
| U5XJZ1 | Nearest Neighbor (>70%) | 99.3% | HMG_box,DUF1898,Sox_N,MAT_Alpha1 |
| U5XK50 | Nearest Neighbor (>70%) | 99.3% | HMG_box,DUF1898,Sox_N |
| U5XMM4 | Nearest Neighbor (>70%) | 94.4% | HMG_box,DUF1898,Sox_N |
| B4DI77 | Nearest Neighbor (>70%) | 87.0% | HMG_box,DUF1898,Sox_N |
| A0AAA9YHN4 | Nearest Neighbor (>70%) | 74.2% | HMG_box,DUF1898,Sox_N,MAT_Alpha1 |
| A0AAA9YHI0 | Nearest Neighbor (50–70%) | 68.0% | HMG_box,DUF1898,Sox_N |
| Q2T9L5 | Nearest Neighbor (50–70%) | 67.8% | HMG_box,DUF1898,HTH_24 |
| Q9H6I2 | Nearest Neighbor (50–70%) | 67.8% | Sox_C_TAD,DUF1898,BAF1_ABF1,HMG_box |
| Q7Z5C4 | Nearest Neighbor (50–70%) | 62.5% | HMG_box |
| Q7Z5C8 | Nearest Neighbor (50–70%) | 62.5% | HMG_box |
| P35716 | Nearest Neighbor (50–70%) | 61.8% | HMG_box,DUF1898 |
| Q05CH0 | Nearest Neighbor (50–70%) | 61.8% | HMG_box,DUF1898 |
| B2R6J0 | Nearest Neighbor (50–70%) | 60.7% | HMG_box,SOXp,DUF1898 |
| O95130 | Nearest Neighbor (50–70%) | 60.0% | HMG_box,DUF1898,HTH_24 |
| Q53ER5 | Nearest Neighbor (50–70%) | 59.7% | Sox_C_TAD,DUF1898,HMG_box,YABBY |
| O00570 | Nearest Neighbor (50–70%) | 59.4% | HMG_box,SOXp,DUF1898 |
| O95129 | Nearest Neighbor (50–70%) | 59.2% | HMG_box,DUF1898,HTH_24 |
| Q15505 | Nearest Neighbor (50–70%) | 59.1% | HMG_box,DUF1898,SOXp |
| B3KU63 | Nearest Neighbor (50–70%) | 58.8% | HemX,LOH1CR12,HMG_box,Exonuc_VII_L,OmpH |
| O95132 | Nearest Neighbor (50–70%) | 56.5% | HMG_box,DUF1898,CHDNT |
| O95131 | Nearest Neighbor (50–70%) | 55.7% | HMG_box,DUF1898,HTH_24 |
| U5XN82 | Nearest Neighbor (50–70%) | 52.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELD0 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A0A411ELD1 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A0A411ELD8 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A0A411ELP6 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A0A411ELP9 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A0A411ELQ6 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A0A411ELR1 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A7WPU9 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A7WPV0 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| A7WPV2 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D1H0M5 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J0C1 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898,HTH_24 |
| D9J0C2 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J0C3 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J0C4 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J0C5 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J0C7 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J0C8 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J2M0 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J2M2 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J2M3 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| D9J2M4 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898,HTH_24 |
| G0Z071 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| H9U921 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| H9U933 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q4JI39 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q52MX7 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q52MX8 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q52MY0 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q52MY2 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1898 |
| Q6J0W5 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q6J4I5 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q6PWT1 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| Q7Z5C5 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1898 |
| Q7Z5C6 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1898 |
| Q8WZ47 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| U5XK60 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| U5XKX7 | Nearest Neighbor (50–70%) | 52.0% | HMG_box,DUF1908,DUF1898 |
| U5XK65 | Nearest Neighbor (50–70%) | 51.3% | HMG_box,DUF1908,DUF1898 |
| A0A411ELE5 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| A0A411ELF4 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| A0A411ELH3 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| A0A411ELN9 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| A0A411ELS2 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| A7WPU7 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| D9J0B8 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| D9J0B9 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| D9J2M1 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| G0Z068 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| G0Z069 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| G0Z070 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| H9U923 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| Q52MX9 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |
| Q52MY1 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1898 |
| Q6J0W4 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898,HTH_24 |
| U5XN77 | Nearest Neighbor (50–70%) | 50.6% | HMG_box,DUF1908,DUF1898 |