TF-to-motif prediction search
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Primary prediction is the highest-priority evidence assigned to a UniProt sequence record in the ModCREDB hierarchy. A record can also contain additional lower-priority motif assignments on its TF page. UniProtKB reviewed means a manually curated Swiss-Prot entry; it is not a ModCREDB manual-review label.
UniProt sequence-record resultsShowing 2941-3000 of 5267 matching records · page 50 of 88
| UniProt | Gene | Protein | Primary prediction | PWMs | 3D | PFAM |
|---|---|---|---|---|---|---|
| A0A087X0A2 | ZNF254 | Zinc finger protein 254 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_4,TFIIS_C,zf-CHY,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,Desulfoferrod_N,ADK_lid,DUF2868,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,BolA |
| B4DYT4 | unknown | Zinc finger protein 112 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,zf-C2H2,NuA4,zf-C2H2_jaz,KRAB,zf-met,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_6,BolA |
| B4DZK2 | unknown | Zinc finger protein 112 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,zf-C2H2,NuA4,zf-C2H2_jaz,KRAB,zf-met,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_6,BolA |
| B4E0L9 | unknown | cDNA FLJ58216, highly similar to Zinc finger protein 539 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_4,TFIIS_C,zf-CHY,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,Desulfoferrod_N,ADK_lid,DUF2868,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,BolA |
| B7ZAB8 | unknown | cDNA, FLJ79132, highly similar to Zinc finger protein 79 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,C1_4,zf-C2H2,Zn_ribbon_recom,TFIIS_C,DNA_RNApol_7kD,C1_3,zf-C2H2_jaz,YhfH,KRAB,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,zf-MYND,zf-C2H2_6,BolA |
| D2K7E9 | PRDM9 | PR-domain containing protein 9 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,zf-C2H2,DNA_RNApol_7kD,C1_3,zf-C2H2_jaz,zf-trcl,PHD,XPA_N,zf-H2C2_2,DUF2256,Chordopox_RPO7,HTH_18,NADH_oxidored,zf-C2H2_6 |
| F5H032 | ZNF79 | Zinc finger protein 79 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,C1_4,zf-C2H2,Zn_ribbon_recom,TFIIS_C,DNA_RNApol_7kD,C1_3,zf-C2H2_jaz,YhfH,KRAB,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-MYND,zf-C2H2_6,BolA |
| F5H2M4 | ZNF254 | Zinc finger protein 254 | Nearest Neighbor (>70%) | 113 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_4,TFIIS_C,zf-CHY,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,Desulfoferrod_N,ADK_lid,DUF2868,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,BolA |
| O75806 | HOXA-9 | Homeobox protein | Nearest Neighbor (>70%) | 113 | 1 | Hox9_act,Homeobox |
| A0A087WZJ7 | ZNF254 | Zinc finger protein 254 | Nearest Neighbor (>70%) | 112 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_4,TFIIS_C,zf-CHY,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,Desulfoferrod_N,ROS_MUCR,ADK_lid,DUF2868,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,BolA |
| A0A0G2JQ02 | PROP1 | Homeobox protein prophet of Pit-1 (Pituitary-specific homeodomain factor) | Nearest Neighbor (>70%) | 112 | 1 | WWbp,Homeobox,Homeobox_KN |
| A0A087WVB7 | SHOX2 | SHOX homeobox 2 | Nearest Neighbor (>70%) | 111 | 1 | MRP-L20,Homeobox,Homeobox_KN |
| A0A0A0MTF4 | HOXD8 | Homeobox protein Hox-D8 | Nearest Neighbor (>70%) | 111 | 1 | Homeobox,Homeobox_KN |
| A0A0M3L9V7 | CDX2 | Homeobox protein miniCDX2 variant | Nearest Neighbor (>70%) | 111 | 1 | Homeobox,CAP_N,Homeobox_KN,Homez |
| A0A8J9C2I7 | PITX2 | Homeobox protein | Nearest Neighbor (>70%) | 111 | 1 | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D2K7F0 | PRDM9 | PR-domain containing protein 9 | Nearest Neighbor (>70%) | 111 | 1 | zf-C2H2_4,zf-C2H2,DNA_RNApol_7kD,C1_3,zf-C2H2_jaz,zf-trcl,PHD,XPA_N,zf-met,zf-H2C2_2,DUF2256,Yippee,HTH_18,DZR,Chordopox_RPO7,NADH_oxidored,zf-C2H2_6,zf-UBP |
| Q8N8T3 | unknown | cDNA FLJ38903 fis, clone NT2NE2001252, highly similar to HOMEOBOX PROTEIN HOX-B8 | Nearest Neighbor (>70%) | 111 | 1 | Homeobox,Homeobox_KN |
| A0A0A0MR11 | ZNF33A | Zinc finger protein 248 | Nearest Neighbor (>70%) | 110 | 1 | zf-C2H2_4,C1_4,zf-C2H2,zf-C2H2_jaz,KRAB,zf-H2C2_2,Siva,HTH_18,Zn_Tnp_IS1595,zf-H2C2_5,zf-C2H2_6,BolA |
| A6NLG4 | hCG_1786841 | HCG1786841, isoform CRA_b (cDNA FLJ38019 fis, clone CTONG2012758, highly similar to Short stature homeobox protein 2) | Nearest Neighbor (>70%) | 110 | 1 | MRP-L20,Homeobox,Homeobox_KN,OAR |
| B3KU46 | unknown | Zinc finger protein 34 | Nearest Neighbor (>70%) | 110 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,BHD_2,XPA_N,zf-H2C2_2,Yippee,C1_1,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,DZR,LIM,DNA_RNApol_7kD,CxxC_CxxC_SSSS,zf-C2HC_2 |
| B6DP74 | ESR1 | Estrogen receptor alpha splice variant | Nearest Neighbor (>70%) | 110 | 1 | zf-C4 |
| B7ZMB1 | ZNF214 | ZNF214 protein (Zinc finger protein 214) | Nearest Neighbor (>70%) | 110 | 1 | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,DNA_RNApol_7kD,C1_3,zf-C2H2_jaz,zf-trcl,KRAB,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,FYDLN_acid,zf-C2H2_6 |
| M0QY11 | ZNF544 | Zinc finger protein 544 | Nearest Neighbor (>70%) | 110 | 1 | zf-C2H2_4,C1_4,zf-C2H2,OGG_N,DUF2688,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Yippee,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,BolA,CpXC,zf-C2H2_6,Csm1 |
| M0R229 | NR1H2 | Nuclear receptor subfamily 1 group H member 2 | Nearest Neighbor (>70%) | 110 | 1 | zf-C4 |
| Q17RW3 | ZNF619 | ZNF619 protein | Nearest Neighbor (>70%) | 110 | 1 | zf-C2H2_4,C1_4,DUF1768,zf-C2H2,Zn_ribbon_recom,TFIIS_C,DNA_RNApol_7kD,zf-C2H2_jaz,zf-trcl,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Yippee,Zn_Tnp_IS1595,CpXC,zf-C2H2_6 |
| A0A1W2PQG7 | PAX6 | Paired box protein Pax-6 (Oculorhombin) | Nearest Neighbor (>70%) | 109 | 1 | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| B2RD90 | unknown | Zinc finger protein 768 | Nearest Neighbor (>70%) | 109 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| B3KQG1 | unknown | Paired box protein Pax-6 (Oculorhombin) | Nearest Neighbor (>70%) | 109 | 1 | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| H3BS42 | ZNF768 | Zinc finger protein 768 | Nearest Neighbor (>70%) | 109 | 1 | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| Q15636 | unknown | Transcription factor | Nearest Neighbor (>70%) | 109 | 1 | KRAB,SCAN |
| Q6IB50 | HOXC6 | HOXC6 protein | Nearest Neighbor (>70%) | 109 | 1 | Homeobox,Homeobox_KN |
| W5S2M5 | unknown | Type 1 PAX3-MAML3 fusion protein | Nearest Neighbor (>70%) | 109 | 1 | Pax7,Homeobox_KN,Homeobox |
| A8K2N2 | unknown | cDNA FLJ78343 | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,C1_4,zf-C2H2,OGG_N,DUF2688,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,Yippee,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,CpXC,zf-C2H2_6,GATA,Csm1 |
| B4DWJ4 | unknown | Zinc finger protein 7 | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,C1_4,zf-C2H2,DNA_RNApol_7kD,zf-C2H2_jaz,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Yippee,zf-C2H2_6,BolA |
| B4DYI9 | unknown | cDNA FLJ53843, weakly similar to Zinc finger protein 33A | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,C1_4,CpXC,zf-C2H2,C1_3,zf-C2H2_jaz,ZZ,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,C1_1,GAGA,zf-C2HC_2,FYDLN_acid,zf-C2H2_6,GATA |
| B7Z9B3 | unknown | cDNA FLJ51614, highly similar to Zinc finger protein 619 | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,C1_4,DUF1768,zf-C2H2,Zn_ribbon_recom,TFIIS_C,DNA_RNApol_7kD,zf-C2H2_jaz,zf-trcl,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,zinc_ribbon_2,Zn_Tnp_IS1595,Yippee,CpXC,zf-C2H2_6 |
| O14849 | unknown | Zinc finger protein | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,zf-H2C2_2,zf-C2H2_6,zf-C2H2 |
| Q2T9G7 | ZNF304 | ZNF304 protein | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,zf-C2H2,Rpr2,Zn_ribbon_recom,zf-C2H2_jaz,KRAB,zf-H2C2_2,CxxC_CxxC_SSSS,Yippee,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-H2C2_5,zf-C2H2_6 |
| Q6RFR4 | HZF41 | Zinc finger protein 283 (Zinc finger protein 331) | Nearest Neighbor (>70%) | 108 | 1 | zf-C2H2_4,C1_4,zf-C2H2,FYVE,zf-BED,zf-C2H2_jaz,zf-trcl,zf-AN1,XPA_N,Ribosomal_L17,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,DUF4389,Zn_Tnp_IS1595,zf-C2H2_6,Csm1 |
| A0A087WXT3 | ZNF33B | Zinc finger protein 33B | Nearest Neighbor (>70%) | 107 | 1 | zf-C2H2_4,C1_4,zf-C2H2,zf-C2H2_jaz,zf-AN1,KRAB,zf-H2C2_2,HTH_Tnp_ISL3,Siva,Zn_Tnp_IS1595,C1_1,zf-H2C2_5,XS,zf-C2H2_6,GATA,BolA |
| A0AUX1 | ZNF33A | ZNF33A protein | Nearest Neighbor (>70%) | 107 | 1 | zf-C2H2_4,C1_4,zf-C2H2,zf-C2H2_jaz,KRAB,zf-H2C2_2,Siva,HTH_18,Zn_Tnp_IS1595,zf-H2C2_5,zf-C2H2_6,BolA |
| Q59F42 | unknown | Zinc finger protein 7 | Nearest Neighbor (>70%) | 107 | 1 | zf-C2H2_4,C1_4,zf-C2H2,BHD_1,zf-C2H2_jaz,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,zf-C2H2_6,BolA |
| Q59FP3 | unknown | Zinc finger protein 519 variant | Nearest Neighbor (>70%) | 107 | 1 | zf-C2H2_4,zf-C2H2,zf-BED,BHD_1,zf-C2H2_jaz,zf-trcl,DNA_RNApol_7kD,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,DUF82,Zn_Tnp_IS1595,DUF164,zf-C2H2_6,LIM,Ribosomal_L44,BolA |
| A0A1W2PPM5 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 106 | 1 | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRG3 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 106 | 1 | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 106 | 1 | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 106 | 1 | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 106 | 1 | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B2R956 | unknown | Zinc finger protein 567 | Nearest Neighbor (>70%) | 106 | 1 | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_1,Cys_rich_CPXG,A2L_zn_ribbon,C1_4,zf-RING_3,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,PHD,DZR,GATA,DNA_RNApol_7kD,CxxC_CxxC_SSSS,CpXC,FYDLN_acid |
| B5TZ78 | ESR1 | Estrogen receptor alpha splice variant | Nearest Neighbor (>70%) | 106 | 1 | zf-C4 |
| D2K7E6 | PRDM9 | PR-domain containing protein 9 | Nearest Neighbor (>70%) | 106 | 1 | zf-C2H2_4,zf-C2H2,DNA_RNApol_7kD,C1_3,zf-C2H2_jaz,zf-trcl,PHD,XPA_N,zf-H2C2_2,DUF2256,DUF2321,zf-C2H2_6,zf-UBP |
| F8VWZ5 | HLX | H2.0-like homeobox protein (Homeobox protein HLX1) | Nearest Neighbor (>70%) | 106 | 1 | ArsC,CDC45,Homeobox,Homeobox_KN,Paf1 |
| Q59FE0 | unknown | Zinc finger protein 41 variant | Nearest Neighbor (>70%) | 106 | 1 | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,Rpr2,Zn_ribbon_recom,DNA_RNApol_7kD,zf-C2H2_jaz,zf-trcl,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2389,MAT_Alpha1,BolA |
| O95779 | ZNF682 | UniProtKB entry deleted | Nearest Neighbor (>70%) | 106 | 0 | zf-C2H2_4,zf-C2H2,NifU_N,C1_3,zf-C2H2_jaz,zf-trcl,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,DUF164,Zn_Tnp_IS1595,zf-C2H2_6,BolA |
| A0A1W2PQM7 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 105 | 1 | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PS91 | PAX6 | Paired box protein Pax-6 | Nearest Neighbor (>70%) | 105 | 1 | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B7ZMC8 | BARHL1 | BarH-like homeobox 1 | Nearest Neighbor (>70%) | 105 | 1 | SAGA-Tad1,Homeobox |
| Q9H3U2 | smap-7 | SMAP-7 | Nearest Neighbor (>70%) | 105 | 1 | zf-C2H2_4,zf-C2H2,Evr1_Alr,C1_3,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,GAGA,C1_1,C1_4,TFIIS_C,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,C1_2,zf-HIT,DUF1062,ADK_lid,zf-H2C2_5,SprT-like,LIM,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,FYDLN_acid,Ribosomal_L44,BolA |
| B3KMZ4 | unknown | Zinc finger protein 112 | Nearest Neighbor (>70%) | 104 | 1 | zf-C2H2_4,zf-C2H2,NuA4,zf-C2H2_jaz,KRAB,zf-met,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_6,BolA |
| Q12777 | PAX-3 | PAX-3 protein | Nearest Neighbor (>70%) | 104 | 1 | Homeobox_KN,Homeobox,QLQ,Pax7,HA |