JASPAR motif
MA0680.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1491 | 0.0149 | 0.0215 | 0.8144 |
| 2 | 0.9893 | 0.0048 | 0.0043 | 0.0016 |
| 3 | 0.9992 | 0.0008 | 0.0000 | 0.0000 |
| 4 | 0.0016 | 0.0056 | 0.0008 | 0.9920 |
| 5 | 0.0027 | 0.7841 | 0.0064 | 0.2068 |
| 6 | 0.3039 | 0.0072 | 0.6889 | 0.0000 |
| 7 | 0.9946 | 0.0000 | 0.0027 | 0.0027 |
| 8 | 0.0032 | 0.0000 | 0.0000 | 0.9968 |
| 9 | 0.0056 | 0.0066 | 0.0024 | 0.9854 |
| 10 | 0.9097 | 0.0177 | 0.0115 | 0.0611 |
TFs using this motif
3 known/direct, 14 nearest-neighbor >70%, 28 nearest-neighbor 50–70%, 0 structure-derived. Showing all 45 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0AAQ5BGJ6 | Known | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX | |
| F8TAD1 | Known | Homeobox,Pax7,Homeobox_KN,Fork_head | |
| P23759 | Known | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX | |
| C7FNH7 | Nearest Neighbor (>70%) | 96.2% | HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_23,PAX |
| A0AAQ5BGK0 | Nearest Neighbor (>70%) | 94.0% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A455R6J4 | Nearest Neighbor (>70%) | 75.8% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| B2R940 | Nearest Neighbor (>70%) | 73.8% | HTH_29,HTH_28,HTH_32,HTH_23,PAX |
| A0A1P8LI09 | Nearest Neighbor (>70%) | 72.6% | MarR_2,HTH_29,HTH_28,HTH_32,HTH_23,PAX |
| A0A0S2Z4P2 | Nearest Neighbor (>70%) | 71.4% | Pax2_C,HTH_Tnp_IS1,Ribosomal_S13_N,HTH_23,PAX |
| A0A087WVB7 | Nearest Neighbor (>70%) | 70.9% | MRP-L20,Homeobox,Homeobox_KN |
| A6NLG4 | Nearest Neighbor (>70%) | 70.9% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| O60902 | Nearest Neighbor (>70%) | 70.9% | MRP-L20,Homeobox,OAR,Sporozoite_P67,Homeobox_KN |
| Q12777 | Nearest Neighbor (>70%) | 70.8% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| W5S2M5 | Nearest Neighbor (>70%) | 70.7% | Pax7,Homeobox_KN,Homeobox |
| A0A7P0T907 | Nearest Neighbor (>70%) | 70.0% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| Q06710 | Nearest Neighbor (>70%) | 70.0% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| R9W7C9 | Nearest Neighbor (>70%) | 70.0% | Pax2_C,HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,HTH_32,HTH_23,PAX |
| Q56H36 | Nearest Neighbor (50–70%) | 69.0% | HTH_Tnp_IS1,HTH_5,Fe_dep_repress,HTH_29,HTH_23,PAX |
| J9RYE1 | Nearest Neighbor (50–70%) | 67.8% | Fork_head |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 66.1% | Homeobox,Homeobox_KN |
| Q6IT45 | Nearest Neighbor (50–70%) | 65.7% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 65.5% | WWbp,Homeobox,Homeobox_KN |
| D6RBG8 | Nearest Neighbor (50–70%) | 65.5% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| J9SW06 | Nearest Neighbor (50–70%) | 63.8% | Fork_head |
| J9SY82 | Nearest Neighbor (50–70%) | 63.8% | Fork_head |
| A0A1W2PQW3 | Nearest Neighbor (50–70%) | 62.4% | PAX,HTH_Tnp_IS1,HTH_32 |
| A0A5F9ZHY1 | Nearest Neighbor (50–70%) | 62.2% | Homeobox |
| A0A2R8Y683 | Nearest Neighbor (50–70%) | 59.5% | Homeobox,Homeobox_KN |
| B1B1S6 | Nearest Neighbor (50–70%) | 58.5% | Homeobox,HA,Homeobox_KN |
| Q9HB31 | Nearest Neighbor (50–70%) | 57.4% | Homeobox,Nairo_nucleo,P12 |
| C0KTE2 | Nearest Neighbor (50–70%) | 54.2% | Homeobox,Pax2_C,DUF765 |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 53.2% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 53.2% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT3 | Nearest Neighbor (50–70%) | 53.2% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 53.0% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| A0A2R8Y4G1 | Nearest Neighbor (50–70%) | 52.6% | Homeobox,Homeobox_KN |
| A0A2R8Y8C8 | Nearest Neighbor (50–70%) | 52.6% | Homeobox,Homeobox_KN |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 52.2% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| B3KQG1 | Nearest Neighbor (50–70%) | 52.2% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| G3V5S4 | Nearest Neighbor (50–70%) | 51.6% | HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| Q6YFJ8 | Nearest Neighbor (50–70%) | 51.6% | HTH_Tnp_IS1,Ribosomal_S13_N,Homeobox,HTH_32,HTH_29,HTH_23,PAX |
| Q96PT4 | Nearest Neighbor (50–70%) | 51.6% | CENP-B_N,HTH_3,Homeobox,Tautomerase,HTH_26,Homeobox_KN |
| E7EQT0 | Nearest Neighbor (50–70%) | 50.1% | HTH_Tnp_IS1,HTH_29,Ribosomal_S13_N,Homeobox,HTH_32,HTH_23,PAX |
| Q15270 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |
| Q9UD57 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |