JASPAR motif
MA0887.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2482 | 0.2288 | 0.3917 | 0.1314 |
| 2 | 0.2591 | 0.3175 | 0.3330 | 0.0904 |
| 3 | 0.1022 | 0.2002 | 0.0230 | 0.6746 |
| 4 | 0.4939 | 0.2219 | 0.2388 | 0.0454 |
| 5 | 0.9675 | 0.0036 | 0.0289 | 0.0000 |
| 6 | 0.0000 | 0.0081 | 0.0324 | 0.9594 |
| 7 | 0.0265 | 0.0529 | 0.0195 | 0.9011 |
| 8 | 0.8965 | 0.0016 | 0.0823 | 0.0195 |
| 9 | 0.1689 | 0.2658 | 0.3446 | 0.2208 |
| 10 | 0.1814 | 0.4203 | 0.2480 | 0.1502 |
TFs using this motif
1 known/direct, 0 nearest-neighbor >70%, 40 nearest-neighbor 50–70%, 0 structure-derived. Showing all 41 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| P49640 | Known | Homeobox | |
| Q14548 | Nearest Neighbor (50–70%) | 62.5% | Homeobox |
| Q6FG31 | Nearest Neighbor (50–70%) | 59.2% | Homeobox,Homeobox_KN |
| Q9HB13 | Nearest Neighbor (50–70%) | 59.2% | Homeobox,Homeobox_KN |
| B3KNJ7 | Nearest Neighbor (50–70%) | 58.9% | DUF4074,Homeobox |
| A4D182 | Nearest Neighbor (50–70%) | 57.8% | DUF4074,Homeobox |
| B3KPN8 | Nearest Neighbor (50–70%) | 57.8% | DUF4074,Homeobox_KN,Homeobox |
| O43365 | Nearest Neighbor (50–70%) | 57.8% | DUF4074,Homeobox_KN,Homeobox |
| Q86TF7 | Nearest Neighbor (50–70%) | 57.4% | Homeobox,DUF2209,Homeobox_KN |
| Q14543 | Nearest Neighbor (50–70%) | 56.7% | Homeobox,Terminase_5,Homeobox_KN |
| A0A090N7W7 | Nearest Neighbor (50–70%) | 56.1% | Homeobox,Upf2 |
| Q9UDY3 | Nearest Neighbor (50–70%) | 55.9% | Homeobox,DUF1183,QLQ,MRP-S27 |
| Q00444 | Nearest Neighbor (50–70%) | 55.5% | Homeobox,Homeobox_KN |
| Q16124 | Nearest Neighbor (50–70%) | 55.5% | Homeobox,DUF2209 |
| Q15270 | Nearest Neighbor (50–70%) | 53.4% | Homeobox |
| Q6IB50 | Nearest Neighbor (50–70%) | 53.4% | Homeobox,Homeobox_KN |
| Q9UD57 | Nearest Neighbor (50–70%) | 53.4% | Homeobox |
| Q13028 | Nearest Neighbor (50–70%) | 52.9% | Homeobox,Homeobox_KN,Homez |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 52.5% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 52.5% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 52.5% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 52.5% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 52.5% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 52.5% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 52.5% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 52.5% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I8 | Nearest Neighbor (50–70%) | 52.5% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 52.5% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 52.5% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| Q96CA4 | Nearest Neighbor (50–70%) | 51.8% | Homeobox |
| B3KXT6 | Nearest Neighbor (50–70%) | 50.9% | Homeobox,CDC45,Paf1 |
| F8VWZ5 | Nearest Neighbor (50–70%) | 50.9% | ArsC,CDC45,Homeobox,Homeobox_KN,Paf1 |
| Q14774 | Nearest Neighbor (50–70%) | 50.9% | Homeobox,CDC45,Paf1 |
| A0A669K9T0 | Nearest Neighbor (50–70%) | 50.8% | Hox9_act,HTH_23,Homeobox |
| A0A669KBC8 | Nearest Neighbor (50–70%) | 50.8% | Hox9_act,HTH_23,Homeobox |
| O75805 | Nearest Neighbor (50–70%) | 50.8% | Homeobox |
| O75806 | Nearest Neighbor (50–70%) | 50.8% | Hox9_act,Homeobox |
| A0A0A0MTF4 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,Homeobox_KN |
| Q8N7U7 | Nearest Neighbor (50–70%) | 50.0% | Homeobox |
| Q8N8T3 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,Homeobox_KN |
| Q9NP08 | Nearest Neighbor (50–70%) | 50.0% | Homeobox,Nha1_C |