JASPAR motif
MA0899.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2762 | 0.1698 | 0.3571 | 0.1970 |
| 2 | 0.1744 | 0.1264 | 0.6028 | 0.0964 |
| 3 | 0.0178 | 0.4500 | 0.0069 | 0.5254 |
| 4 | 0.5634 | 0.3036 | 0.0687 | 0.0643 |
| 5 | 0.8534 | 0.0463 | 0.0731 | 0.0272 |
| 6 | 0.0419 | 0.0013 | 0.0000 | 0.9568 |
| 7 | 0.6941 | 0.0098 | 0.0141 | 0.2821 |
| 8 | 0.9441 | 0.0041 | 0.0086 | 0.0433 |
| 9 | 0.8911 | 0.0604 | 0.0133 | 0.0352 |
| 10 | 0.5952 | 0.1479 | 0.1108 | 0.1462 |
| 11 | 0.3600 | 0.2493 | 0.1468 | 0.2440 |
TFs using this motif
1 known/direct, 4 nearest-neighbor >70%, 26 nearest-neighbor 50–70%, 0 structure-derived. Showing all 31 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| P31260 | Known | Homeobox,Homeobox_KN | |
| A0A669K9T0 | Nearest Neighbor (>70%) | 78.8% | Hox9_act,HTH_23,Homeobox |
| A0A669KBC8 | Nearest Neighbor (>70%) | 78.8% | Hox9_act,HTH_23,Homeobox |
| O75805 | Nearest Neighbor (>70%) | 78.8% | Homeobox |
| O75806 | Nearest Neighbor (>70%) | 78.8% | Hox9_act,Homeobox |
| Q16124 | Nearest Neighbor (50–70%) | 67.5% | Homeobox,DUF2209 |
| Q6IB50 | Nearest Neighbor (50–70%) | 66.6% | Homeobox,Homeobox_KN |
| Q14DW8 | Nearest Neighbor (50–70%) | 65.7% | Homeobox_KN,Homeobox,MerR_1,DUF3528 |
| Q00444 | Nearest Neighbor (50–70%) | 65.5% | Homeobox,Homeobox_KN |
| Q14543 | Nearest Neighbor (50–70%) | 65.0% | Homeobox,Terminase_5,Homeobox_KN |
| B2R9U5 | Nearest Neighbor (50–70%) | 64.2% | Rox3,Homeobox,DUF3528 |
| H0YIA6 | Nearest Neighbor (50–70%) | 64.2% | Homeobox_KN,Homeobox,DUF3528,Rox3 |
| Q14548 | Nearest Neighbor (50–70%) | 64.1% | Homeobox |
| A0A0A0MTF4 | Nearest Neighbor (50–70%) | 64.0% | Homeobox,Homeobox_KN |
| Q6FG31 | Nearest Neighbor (50–70%) | 63.9% | Homeobox,Homeobox_KN |
| Q96CA4 | Nearest Neighbor (50–70%) | 63.7% | Homeobox |
| Q8N8T3 | Nearest Neighbor (50–70%) | 62.3% | Homeobox,Homeobox_KN |
| Q86TF7 | Nearest Neighbor (50–70%) | 61.6% | Homeobox,DUF2209,Homeobox_KN |
| B3KNJ7 | Nearest Neighbor (50–70%) | 61.1% | DUF4074,Homeobox |
| Q9HB13 | Nearest Neighbor (50–70%) | 60.3% | Homeobox,Homeobox_KN |
| A4D182 | Nearest Neighbor (50–70%) | 59.3% | DUF4074,Homeobox |
| B3KPN8 | Nearest Neighbor (50–70%) | 59.3% | DUF4074,Homeobox_KN,Homeobox |
| O43365 | Nearest Neighbor (50–70%) | 59.3% | DUF4074,Homeobox_KN,Homeobox |
| Q6DI00 | Nearest Neighbor (50–70%) | 56.8% | Homeobox,HoxA13_N,Homeobox_KN,Homez |
| Q9UDY3 | Nearest Neighbor (50–70%) | 56.1% | Homeobox,DUF1183,QLQ,MRP-S27 |
| Q4VAU3 | Nearest Neighbor (50–70%) | 55.9% | CC,Homeobox,Homeobox_KN,Caudal_act |
| Q13028 | Nearest Neighbor (50–70%) | 55.1% | Homeobox,Homeobox_KN,Homez |
| A0A0M3L9V7 | Nearest Neighbor (50–70%) | 54.2% | Homeobox,CAP_N,Homeobox_KN,Homez |
| B3KXT6 | Nearest Neighbor (50–70%) | 52.5% | Homeobox,CDC45,Paf1 |
| F8VWZ5 | Nearest Neighbor (50–70%) | 52.5% | ArsC,CDC45,Homeobox,Homeobox_KN,Paf1 |
| Q14774 | Nearest Neighbor (50–70%) | 52.5% | Homeobox,CDC45,Paf1 |