JASPAR motif
MA1561.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.6243 | 0.1952 | 0.0797 | 0.1009 |
| 2 | 0.1339 | 0.7472 | 0.0507 | 0.0682 |
| 3 | 0.0484 | 0.8609 | 0.0343 | 0.0565 |
| 4 | 0.0482 | 0.0267 | 0.8759 | 0.0492 |
| 5 | 0.9672 | 0.0294 | 0.0023 | 0.0011 |
| 6 | 0.9930 | 0.0023 | 0.0047 | 0.0000 |
| 7 | 0.0000 | 0.9965 | 0.0000 | 0.0035 |
| 8 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 9 | 0.8464 | 0.0902 | 0.0436 | 0.0198 |
| 10 | 0.1031 | 0.1687 | 0.0456 | 0.6827 |
| 11 | 0.2319 | 0.2459 | 0.3571 | 0.1651 |
TFs using this motif
1 known/direct, 2 nearest-neighbor >70%, 84 nearest-neighbor 50–70%, 0 structure-derived. Showing all 87 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| O15370 | Known | HMG_box,DUF1898,Ribosomal_60s | |
| Q05CH0 | Nearest Neighbor (>70%) | 83.5% | HMG_box,DUF1898 |
| B3KU63 | Nearest Neighbor (>70%) | 70.3% | HemX,LOH1CR12,HMG_box,Exonuc_VII_L,OmpH |
| Q7Z5C4 | Nearest Neighbor (50–70%) | 68.4% | HMG_box |
| Q7Z5C8 | Nearest Neighbor (50–70%) | 68.4% | HMG_box |
| A0AAA9YHN4 | Nearest Neighbor (50–70%) | 67.5% | HMG_box,DUF1898,Sox_N,MAT_Alpha1 |
| U5XJZ1 | Nearest Neighbor (50–70%) | 67.5% | HMG_box,DUF1898,Sox_N,MAT_Alpha1 |
| U5XK50 | Nearest Neighbor (50–70%) | 67.5% | HMG_box,DUF1898,Sox_N |
| U5XMM4 | Nearest Neighbor (50–70%) | 67.5% | HMG_box,DUF1898,Sox_N |
| A0AAA9YHI0 | Nearest Neighbor (50–70%) | 65.7% | HMG_box,DUF1898,Sox_N |
| Q15505 | Nearest Neighbor (50–70%) | 65.7% | HMG_box,DUF1898,SOXp |
| Q9H7I9 | Nearest Neighbor (50–70%) | 65.7% | HMG_box |
| B4DI77 | Nearest Neighbor (50–70%) | 64.4% | HMG_box,DUF1898,Sox_N |
| Q2T9L5 | Nearest Neighbor (50–70%) | 61.3% | HMG_box,DUF1898,HTH_24 |
| Q9H6I2 | Nearest Neighbor (50–70%) | 61.3% | Sox_C_TAD,DUF1898,BAF1_ABF1,HMG_box |
| O00570 | Nearest Neighbor (50–70%) | 61.0% | HMG_box,SOXp,DUF1898 |
| F5H0I3 | Nearest Neighbor (50–70%) | 59.2% | HMG_box,HemX,DUF1898,Exonuc_VII_L |
| Q53EV3 | Nearest Neighbor (50–70%) | 59.2% | HMG_box,DUF1898,LOH1CR12 |
| Q6IBT9 | Nearest Neighbor (50–70%) | 59.2% | HMG_box,DUF1898,KLRAQ,LOH1CR12 |
| T2CZM2 | Nearest Neighbor (50–70%) | 59.2% | HMG_box,HemX,DUF1898,Exonuc_VII_L |
| B4E3N9 | Nearest Neighbor (50–70%) | 58.9% | HMG_box,DUF1898 |
| O95129 | Nearest Neighbor (50–70%) | 58.8% | HMG_box,DUF1898,HTH_24 |
| P35712 | Nearest Neighbor (50–70%) | 57.8% | HMG_box,DUF1898 |
| B2R6J0 | Nearest Neighbor (50–70%) | 57.7% | HMG_box,SOXp,DUF1898 |
| O95130 | Nearest Neighbor (50–70%) | 57.4% | HMG_box,DUF1898,HTH_24 |
| Q52MY2 | Nearest Neighbor (50–70%) | 55.0% | HMG_box,DUF1898 |
| U5XK65 | Nearest Neighbor (50–70%) | 54.4% | HMG_box,DUF1908,DUF1898 |
| O95131 | Nearest Neighbor (50–70%) | 54.1% | HMG_box,DUF1898,HTH_24 |
| A0A411ELD0 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELD1 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELD8 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELP6 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELP9 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELQ6 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A0A411ELR1 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A7WPU7 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A7WPU9 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A7WPV0 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| A7WPV2 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D1H0M5 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J0C1 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898,HTH_24 |
| D9J0C2 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J0C3 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J0C4 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J0C5 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J0C7 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J0C8 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J2M0 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J2M2 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J2M4 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898,HTH_24 |
| G0Z071 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| H9U921 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q4JI39 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q52MX7 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q52MX8 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q52MY0 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q6J0W5 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q6J4I5 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q6PWT1 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| Q7Z5C5 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1898 |
| Q7Z5C6 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1898 |
| Q8WZ47 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| U5XK60 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| U5XKX7 | Nearest Neighbor (50–70%) | 53.7% | HMG_box,DUF1908,DUF1898 |
| D9J2M3 | Nearest Neighbor (50–70%) | 53.6% | HMG_box,DUF1908,DUF1898 |
| Q53ER5 | Nearest Neighbor (50–70%) | 53.3% | Sox_C_TAD,DUF1898,HMG_box,YABBY |
| O95132 | Nearest Neighbor (50–70%) | 52.9% | HMG_box,DUF1898,CHDNT |
| A0A411ELE5 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| A0A411ELF4 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| A0A411ELN9 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| A0A411ELS2 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| D9J0B8 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| D9J0B9 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| D9J2M1 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| G0Z068 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| G0Z069 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| G0Z070 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| H9U923 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| H9U933 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| Q52MX9 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| Q52MY1 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1898 |
| Q6J0W4 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898,HTH_24 |
| U5XN77 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| U5XN82 | Nearest Neighbor (50–70%) | 52.5% | HMG_box,DUF1908,DUF1898 |
| U5XMN5 | Nearest Neighbor (50–70%) | 51.3% | HMG_box,DUF1908,DUF1898 |
| A0A411ELH3 | Nearest Neighbor (50–70%) | 51.2% | HMG_box,DUF1908,DUF1898 |
| G0Z067 | Nearest Neighbor (50–70%) | 51.2% | HMG_box,DUF1908,DUF1898 |