CisBP motif
M03076_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2646 | 0.2751 | 0.1734 | 0.2869 |
| 2 | 0.1500 | 0.0521 | 0.0206 | 0.7772 |
| 3 | 0.8607 | 0.0108 | 0.0638 | 0.0646 |
| 4 | 0.9807 | 0.0049 | 0.0105 | 0.0039 |
| 5 | 0.0597 | 0.1002 | 0.0325 | 0.8076 |
| 6 | 0.0368 | 0.2974 | 0.0767 | 0.5891 |
| 7 | 0.3585 | 0.1754 | 0.1955 | 0.2706 |
| 8 | 0.6651 | 0.0647 | 0.2506 | 0.0196 |
| 9 | 0.8672 | 0.0257 | 0.0785 | 0.0287 |
| 10 | 0.0092 | 0.0185 | 0.0063 | 0.9660 |
| 11 | 0.1190 | 0.0797 | 0.0163 | 0.7851 |
| 12 | 0.8676 | 0.0142 | 0.0345 | 0.0837 |
| 13 | 0.4080 | 0.1784 | 0.2475 | 0.1660 |
TFs using this motif
1 known/direct, 7 nearest-neighbor >70%, 35 nearest-neighbor 50–70%, 0 structure-derived. Showing all 43 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q96QS3 | Known | Homeobox,DNA_pol_phi,OAR | |
| A0A455R6J4 | Nearest Neighbor (>70%) | 76.1% | Med3,Homeobox,Rotamase_2,Homeobox_KN |
| Q12777 | Nearest Neighbor (>70%) | 72.9% | Homeobox_KN,Homeobox,QLQ,Pax7,HA |
| O60902 | Nearest Neighbor (>70%) | 71.6% | MRP-L20,Homeobox,OAR,Sporozoite_P67,Homeobox_KN |
| W5S2M5 | Nearest Neighbor (>70%) | 71.4% | Pax7,Homeobox_KN,Homeobox |
| A0AAQ5BGK0 | Nearest Neighbor (>70%) | 71.2% | Homeobox_KN,Homeobox,HTH_32,HTH_23,Pax7,PAX |
| A0A087WVB7 | Nearest Neighbor (>70%) | 70.5% | MRP-L20,Homeobox,Homeobox_KN |
| A6NLG4 | Nearest Neighbor (>70%) | 70.5% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| Q6IT45 | Nearest Neighbor (50–70%) | 67.6% | MRP-L20,Homeobox,Homeobox_KN,OAR |
| A0A8J9C2I7 | Nearest Neighbor (50–70%) | 67.1% | Homeobox,Homeobox_KN,OAR,XRCC4 |
| D6RBG8 | Nearest Neighbor (50–70%) | 67.1% | Homeobox,QLQ,Auxin_canalis,HTH_32,Homeobox_KN |
| A0A1W2PPM5 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PQG7 | Nearest Neighbor (50–70%) | 66.1% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| A0A1W2PQM7 | Nearest Neighbor (50–70%) | 66.1% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_23,PAX |
| A0A1W2PRA4 | Nearest Neighbor (50–70%) | 66.1% | HTH_Tnp_IS1,PAX,Homeobox,HTH_32,Homeobox_KN |
| A0A1W2PRG3 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1W2PRH6 | Nearest Neighbor (50–70%) | 66.1% | Homeobox,Homeobox_KN |
| A0A1W2PS91 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A1X7SBT0 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| A0A5F9ZHY1 | Nearest Neighbor (50–70%) | 66.1% | Homeobox |
| B1B1I8 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B1B1I9 | Nearest Neighbor (50–70%) | 66.1% | Homeobox_KN,Homeobox,PAX,HTH_Tnp_IS1 |
| B3KQG1 | Nearest Neighbor (50–70%) | 66.1% | HTH_Tnp_IS1,HTH_29,Homeobox_KN,Homeobox,HTH_32,HTH_23,PAX |
| B1B1S6 | Nearest Neighbor (50–70%) | 63.6% | Homeobox,HA,Homeobox_KN |
| A0A2R8Y683 | Nearest Neighbor (50–70%) | 62.0% | Homeobox,Homeobox_KN |
| A0A0G2JQ02 | Nearest Neighbor (50–70%) | 60.6% | WWbp,Homeobox,Homeobox_KN |
| A0A2R8Y4G1 | Nearest Neighbor (50–70%) | 59.6% | Homeobox,Homeobox_KN |
| A0A2R8Y8C8 | Nearest Neighbor (50–70%) | 59.6% | Homeobox,Homeobox_KN |
| Q9HB31 | Nearest Neighbor (50–70%) | 56.4% | Homeobox,Nairo_nucleo,P12 |
| Q9UD57 | Nearest Neighbor (50–70%) | 54.2% | Homeobox |
| Q17RH7 | Nearest Neighbor (50–70%) | 52.5% | Homeobox,Terminase_5,Homeobox_KN,Nucleo_P87 |
| Q9UDY3 | Nearest Neighbor (50–70%) | 52.3% | Homeobox,DUF1183,QLQ,MRP-S27 |
| A0A384NPT7 | Nearest Neighbor (50–70%) | 51.7% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| O43812 | Nearest Neighbor (50–70%) | 51.7% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q96PT3 | Nearest Neighbor (50–70%) | 51.7% | CENP-B_N,Homeobox,Sigma70_r3,HTH_26,Homeobox_KN |
| Q14543 | Nearest Neighbor (50–70%) | 51.6% | Homeobox,Terminase_5,Homeobox_KN |
| P0C7M4 | Nearest Neighbor (50–70%) | 50.9% | Homeobox,GRP |
| A0A8V8TM49 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Homeobox_KN |
| A0A8V8TMK4 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Homeobox_KN |
| D2CFI4 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Homeobox_KN |
| D2CFI5 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Homeobox_KN |
| P0DV77 | Nearest Neighbor (50–70%) | 50.8% | Homeobox,Homeobox_KN |
| Q15270 | Nearest Neighbor (50–70%) | 50.6% | Homeobox |