JASPAR motif
MA0079.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1250 | 0.1250 | 0.5000 | 0.2500 |
| 2 | 0.2500 | 0.1250 | 0.5000 | 0.1250 |
| 3 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 4 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 5 | 0.0000 | 0.6250 | 0.2500 | 0.1250 |
| 6 | 0.2500 | 0.0000 | 0.5000 | 0.2500 |
| 7 | 0.0000 | 0.1250 | 0.6250 | 0.2500 |
| 8 | 0.0000 | 0.0000 | 0.7500 | 0.2500 |
| 9 | 0.1250 | 0.1250 | 0.7500 | 0.0000 |
| 10 | 0.2500 | 0.0000 | 0.0000 | 0.7500 |
TFs using this motif
2 known/direct, 4 nearest-neighbor >70%, 49 nearest-neighbor 50–70%, 0 structure-derived. Showing all 55 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| C4PGM0 | Known | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 | |
| P08047 | Known | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 | |
| Q59EY3 | Nearest Neighbor (>70%) | 99.8% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q6BEB4 | Nearest Neighbor (>70%) | 75.8% | zf-C2H2_4,zf-C2H2,zf-ribbon_3,zinc_ribbon_5,zf-C2H2_jaz,zinc_ribbon_4,zf-met,zf-H2C2_2,GFA |
| A8K350 | Nearest Neighbor (>70%) | 71.8% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| Q4G0T0 | Nearest Neighbor (>70%) | 70.9% | zf-C2H2_4,Elf1,zf-C2H2,Zn_Tnp_IS1,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-H2C2_5,RRN7,zf-C2H2_6 |
| B5BUG8 | Nearest Neighbor (50–70%) | 69.7% | zf-C2H2_4,zf-C2H2,zf-BED,IBR,zf-met,Rad50_zn_hook,zf-H2C2_2 |
| B7TQ30 | Nearest Neighbor (50–70%) | 65.3% | zf-C2H2_4,zf-C2H2 |
| B9UZC5 | Nearest Neighbor (50–70%) | 65.3% | zf-C2H2_4,zf-C2H2 |
| V5M1V5 | Nearest Neighbor (50–70%) | 61.4% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| A0A223PZB5 | Nearest Neighbor (50–70%) | 60.2% | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| Q3SY56 | Nearest Neighbor (50–70%) | 59.3% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,RRN7,zf-C2H2_6 |
| B3KXP2 | Nearest Neighbor (50–70%) | 58.5% | zf-C2H2_4,HlyC,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,RRN7,zf-C2H2_6 |
| B2R8P9 | Nearest Neighbor (50–70%) | 57.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| B3KNE6 | Nearest Neighbor (50–70%) | 57.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| O75840 | Nearest Neighbor (50–70%) | 57.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-H2C2_5 |
| Q4ZG79 | Nearest Neighbor (50–70%) | 57.4% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| F2VTX5 | Nearest Neighbor (50–70%) | 56.6% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2 |
| Q32MK9 | Nearest Neighbor (50–70%) | 55.9% | zf-C2H2_4,zf-C2H2,C1_2,zf-C2H2_jaz,zf-met,zf-H2C2_2,GAGA,C1_1,zf-C2H2_6 |
| B2RCZ6 | Nearest Neighbor (50–70%) | 55.5% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| B7ZAX4 | Nearest Neighbor (50–70%) | 55.5% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-met2,zf-met,zf-H2C2_2,RRN7,zf-C2H2_6 |
| I3L417 | Nearest Neighbor (50–70%) | 53.5% | zf-C2H2_4,zf-C2H2,TFIIS_C,Herpes_LMP1,zf-C2H2_jaz,KRAB,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,Yippee,RRN7,zf-C2H2_6,zf-LYAR |
| I3L1J3 | Nearest Neighbor (50–70%) | 53.0% | zf-C2H2_4,zf-C2H2,SCAN,zf-C2H2_jaz,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,zf-C2H2_6,zf-LYAR |
| Q96SZ4 | Nearest Neighbor (50–70%) | 53.0% | zf-C2H2_4,zf-C2H2,SCAN,zf-C2H2_jaz,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,zf-C2H2_6,zf-LYAR |
| O60304 | Nearest Neighbor (50–70%) | 52.6% | zf-C2H2_4,zf-C2H2,zf-ribbon_3,C1_3,zf-C2H2_jaz,Ogr_Delta,YhfH,XPA_N,zf-met,zf-H2C2_2,HypA,GAGA,FdhE,C1_4,zf-RING_3,TFIIS_C,DUF2180,HTH_Tnp_ISL3,Zn_Tnp_IS1595,RRN7,zinc_ribbon_2,zf-C2H2_6,Prok-RING_1,zf-HIT,cEGF,KRAB,DUF82,DZR,LIM,Elf1,SCAN,CxxC_CxxC_SSSS,HTH_18,DUF164,CpXC,FYDLN_acid,zf-LYAR |
| Q86UD4 | Nearest Neighbor (50–70%) | 52.5% | zf-C2H2_4,zf-C2H2,YhfH,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_4,zf-RING_3,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zinc_ribbon_2,zf-C2H2_6,Prok-RING_1,DUF82,LIM,GATA,DNA_RNApol_7kD,DUF1610,CxxC_CxxC_SSSS,zf-C2HC_2,CpXC |
| B7Z4L5 | Nearest Neighbor (50–70%) | 51.8% | zf-C2H2_4,zf-C2H2,Prok-RING_2,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,Yippee,A2L_zn_ribbon,C1_4,zf-RING_3,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,Tnp_zf-ribbon_2,NanE,DUF82,DZR,LIM,Rpr2,zf-BED,DNA_RNApol_7kD,zf-trcl,DUF2072,CxxC_CxxC_SSSS,DUF164,BolA |
| F5H2K2 | Nearest Neighbor (50–70%) | 51.7% | zf-C2H2_4,zf-C2H2,PRP21_like_P,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 |
| Q8WWU2 | Nearest Neighbor (50–70%) | 51.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,RRN7,zf-C2H2_6 |
| Q8WWU3 | Nearest Neighbor (50–70%) | 51.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-H2C2_2,zf-C2H2_6 |
| B7Z2Y7 | Nearest Neighbor (50–70%) | 51.3% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,DUF2180,HTH_Tnp_ISL3,zf-C2H2_6,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,zf-LYAR |
| Q2T9G8 | Nearest Neighbor (50–70%) | 51.3% | zf-C2H2_4,zf-C2H2,Rpr2,Zn_ribbon_recom,TFIIS_C,zf-C2H2_jaz,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,Yippee,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-H2C2_5,zf-C2H2_6 |
| Q5U5N5 | Nearest Neighbor (50–70%) | 51.3% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-H2C2_2,Yippee,HypA,C1_4,TFIIS_C,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,Siva,LIM,GATA,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,Ribosomal_L44 |
| Q9NX65 | Nearest Neighbor (50–70%) | 51.3% | zf-C2H2_4,zf-C2H2,Pox_A3L,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,Myb_DNA-bind_6,C1_4,zf-RING_3,HTH_Tnp_ISL3,zf-C2H2_6,KRAB,Myb_DNA-bind_4,SCAN,CxxC_CxxC_SSSS,HTH_18,zf-C2HC_2,BolA |
| Q5SXM1 | Nearest Neighbor (50–70%) | 51.2% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,DUF1610,Ribosomal_L17,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,BolA |
| Q5TEC3 | Nearest Neighbor (50–70%) | 51.2% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,zf-H2C2_2,Yippee,HypA,C1_4,zf-RING_3,DUF2256,zf-MYND,DUF2321,RRN7,zf-C2H2_6,DUF2039,DZR,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,Cas_CXXC_CXXC,FYDLN_acid,zf-LYAR |
| Q6NUI8 | Nearest Neighbor (50–70%) | 51.2% | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,Prok-RING_1,zf-C2H2_jaz,zf-trcl,KRAB,XPA_N,zf-met,zf-H2C2_2,HTH_Tnp_ISL3,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,RRN7,zf-C2H2_6,LIM |
| Q8N508 | Nearest Neighbor (50–70%) | 51.2% | zf-C2H2_4,zf-C2H2,Zn_ribbon_recom,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,HypA,C1_4,zf-RING_3,TFIIS_C,DUF2180,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-MYND,RRN7,zf-C2H2_6,zf-UBP,zf-HIT,PHD,LIM,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,CpXC,FYDLN_acid,zf-LYAR |
| Q96BR9 | Nearest Neighbor (50–70%) | 51.0% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,DUF1722,zf-met,zf-H2C2_2,BTB,Zn_Tnp_IS1595,DUF3342,DUF2296,zf-C2H2_6,K_tetra |
| A0A0A0MSW5 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-trcl,KRAB,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,GAGA,zf-C2H2_6 |
| A0A2R8YDQ5 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,zinc_ribbon_5,DUF3669,zf-C2H2_jaz,DUF1898,zf-CHY,KRAB,zf-met,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,zf-C2HC_2,zf-C2H2_6 |
| A0A3F2YPB8 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,TFIIS_C,zf-BED,zf-C2H2_jaz,zf-trcl,KRAB,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,C1_1,zf-C2H2_6 |
| A0A8J9FQ52 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,zinc_ribbon_5,DUF3669,zf-C2H2_jaz,DUF1898,zf-CHY,KRAB,zf-met,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,zf-C2HC_2,zf-C2H2_6 |
| B2RD90 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| B4DT98 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,YhfH,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_1,TFIIS_C,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,IGPD,Trm112p,DNA_RNApol_7kD,zf-BED,zf-trcl,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,Ribosomal_L44 |
| B4E2P7 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,YhfH,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_1,TFIIS_C,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,IGPD,DUF2387,Trm112p,Rpr2,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,Ribosomal_L44 |
| H3BS42 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |
| Q14584 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,TFIIS_C,zf-BED,DNA_RNApol_7kD,zf-C2H2_jaz,zf-trcl,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,C1_1,zf-C2H2_6 |
| Q5EBL2 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,GAGA,zf-C2HC_2,zf-C2H2_6,BolA |
| Q6NUN9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,Elf1,zf-C2H2,zinc_ribbon_5,DUF3669,zf-C2H2_jaz,zf-CHY,KRAB,zf-met,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,zf-C2HC_2,zf-C2H2_6 |
| Q6ZNH5 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Zn_ribbon_recom,zf-C2H2_jaz,XPA_N,zf-H2C2_2,Yippee,HypA,GAGA,tRNA-synt_2b,C1_4,zf-RING_3,HTH_Tnp_ISL3,Zn_Tnp_IS1595,DUF2321,zf-C2H2_6,zf-UBP,LIM,Elf1,zf-trcl,CxxC_CxxC_SSSS,FYDLN_acid,zf-LYAR |
| Q7Z3I7 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,C1_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,CxxC_CxxC_SSSS,Yippee,Zn_Tnp_IS1595,MBD,FYDLN_acid,zf-C2H2_6 |
| Q96MR9 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-BED,zf-C2H2_jaz,zf-CHY,KRAB,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6 |
| Q96N48 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,Endonuclease_7,zf-DNL,zf-C2H2_jaz,zf-TRAF,zf-met,XPA_N,zf-H2C2_2,C1_1,C1_4,zinc_ribbon_5,TFIIS_C,zf-CHY,zf-AN1,HTH_Tnp_ISL3,RRN7,zf-C2H2_6,Prok-RING_1,LIM,Elf1,DNA_RNApol_7kD,zf-trcl,zinc_ribbon_4,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,FYDLN_acid |
| Q9H5H4 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,Ogr_Delta,zf-met,XPA_N,zf-H2C2_2,Yippee,RNA_pol_Rpb1_R,OrfB_Zn_ribbon,C1_4,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,DUF2709,Prok-RING_1,LIM,CxxC_CxxC_SSSS,zf-C2HC_2,FYDLN_acid,BolA |