TF-to-motif prediction search
Search ModCREDB
Primary prediction is the highest-priority evidence assigned to a UniProt sequence record in the ModCREDB hierarchy. A record can also contain additional lower-priority motif assignments on its TF page. UniProtKB reviewed means a manually curated Swiss-Prot entry; it is not a ModCREDB manual-review label.
UniProt sequence-record resultsShowing 241-300 of 5267 matching records · page 5 of 88
| UniProt | Gene | Protein | Primary prediction | PWMs | 3D | PFAM |
|---|---|---|---|---|---|---|
| P20226 UniProtKB reviewed (Swiss-Prot) |
TBP | TATA-box-binding protein (TATA sequence-binding protein) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit) | Known | 9 | 1 | Otopetrin,DUF702,TFIIA,Spore_coat_CotO,Neur_chan_memb,zf-DHHC,DUF106,DUF1501,SAGA-Tad1,FemAB,Med15,Tim54,Cellulose_synt,Pex16,FLO_LFY,DUF2215,DUF966,TBP,Lin-8,Hid1,Ycf1,DUF4045,Hom_end_hint,MMR1,RR_TM4-6,Plasmodium_Vir,OAD_gamma,Gti1_Pac2 |
| P23409 UniProtKB reviewed (Swiss-Prot) |
MYF6 | Myogenic factor 6 (Myf-6) (Class C basic helix-loop-helix protein 4) (bHLHc4) (Muscle-specific regulatory factor 4) | Known | 9 | 1 | Myf5,HLH,Basic |
| P28702 UniProtKB reviewed (Swiss-Prot) |
RXRB | Retinoic acid receptor RXR-beta (Nuclear receptor subfamily 2 group B member 2) (Retinoid X receptor beta) | Known | 9 | 1 | Nuc_recep-AF1,Hormone_recep,zf-C4 |
| P32243 UniProtKB reviewed (Swiss-Prot) |
OTX2 | Homeobox protein OTX2 (Orthodenticle homolog 2) | Known | 9 | 1 | Homeobox,TF_Otx |
| P36402 UniProtKB reviewed (Swiss-Prot) |
TCF7 | Transcription factor 7 (TCF-7) (T-cell-specific transcription factor 1) (T-cell factor 1) (TCF-1) | Known | 9 | 1 | HMG_box,DUF1898,MAT_Alpha1,CTNNB1_binding |
| P37231 UniProtKB reviewed (Swiss-Prot) |
PPARG | Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3) | Known | 9 | 1 | PPARgamma_N,Hormone_recep,zf-C4 |
| P49639 UniProtKB reviewed (Swiss-Prot) |
HOXA1 | Homeobox protein Hox-A1 (Homeobox protein Hox-1F) | Known | 9 | 1 | Homeobox |
| P50539 UniProtKB reviewed (Swiss-Prot) |
MXI1 | Max-interacting protein 1 (Max interactor 1) (Class C basic helix-loop-helix protein 11) (bHLHc11) | Known | 9 | 1 | HLH |
| P51449 UniProtKB reviewed (Swiss-Prot) |
RORC | Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma) (Nuclear receptor subfamily 1 group F member 3) (RAR-related orphan receptor C) (Retinoid-related orphan receptor-gamma) | Known | 9 | 1 | Hormone_recep,zf-C4 |
| P52945 UniProtKB reviewed (Swiss-Prot) |
PDX1 | Pancreas/duodenum homeobox protein 1 (PDX-1) (Glucose-sensitive factor) (GSF) (Insulin promoter factor 1) (IPF-1) (Insulin upstream factor 1) (IUF-1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) | Known | 9 | 1 | Homeobox |
| P78337 UniProtKB reviewed (Swiss-Prot) |
PITX1 | Pituitary homeobox 1 (Hindlimb-expressed homeobox protein backfoot) (Homeobox protein PITX1) (Paired-like homeodomain transcription factor 1) | Known | 9 | 1 | Homeobox,Fork_head_N,Homeobox_KN,OAR |
| P85037 UniProtKB reviewed (Swiss-Prot) |
FOXK1 | Forkhead box protein K1 (Myocyte nuclear factor) (MNF) | Known | 9 | 1 | Fork_head,FHA |
| Q06945 UniProtKB reviewed (Swiss-Prot) |
SOX4 | Transcription factor SOX-4 | Known | 9 | 1 | HMG_box,DUF1898 |
| Q12800 UniProtKB reviewed (Swiss-Prot) |
TFCP2 | Alpha-globin transcription factor CP2 (SAA3 enhancer factor) (Transcription factor LSF) | Known | 9 | 1 | CP2,DUF2489 |
| Q13351 UniProtKB reviewed (Swiss-Prot) |
KLF1 | Krueppel-like factor 1 (Erythroid krueppel-like transcription factor) (EKLF) | Known | 9 | 1 | zf-C2H2_4,zf-C2H2,CHORD,zf-BED,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-H2C2_5 |
| Q14653 UniProtKB reviewed (Swiss-Prot) |
IRF3 | Interferon regulatory factor 3 (IRF-3) | Known | 9 | 1 | IRF,IRF-3 |
| Q15306 UniProtKB reviewed (Swiss-Prot) |
IRF4 | Interferon regulatory factor 4 (IRF-4) (Lymphocyte-specific interferon regulatory factor) (LSIRF) (Multiple myeloma oncogene 1) (NF-EM5) | Known | 9 | 1 | Interferon-regulatory factors{3.5.3} |
| Q15475 UniProtKB reviewed (Swiss-Prot) |
SIX1 | Homeobox protein SIX1 (Sine oculis homeobox homolog 1) | Known | 9 | 1 | HTH_3,Homez,Homeobox,KilA-N,Homeobox_KN |
| Q15915 UniProtKB reviewed (Swiss-Prot) |
ZIC1 | Zinc finger protein ZIC 1 (Zinc finger protein 201) (Zinc finger protein of the cerebellum 1) | Known | 9 | 1 | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| Q6P9G9 UniProtKB reviewed (Swiss-Prot) |
ZNF449 | Zinc finger protein 449 (Zinc finger and SCAN domain-containing protein 19) | Known | 9 | 1 | zf-C2H2_4,C1_4,zf-RING_3,zf-C2H2,zf-ribbon_3,SCAN,zf-CHCC,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_6 |
| Q7RTS1 UniProtKB reviewed (Swiss-Prot) |
BHLHA15 | Class A basic helix-loop-helix protein 15 (bHLHa15) (Class B basic helix-loop-helix protein 8) (bHLHb8) (Muscle, intestine and stomach expression 1) (MIST-1) | Known | 9 | 1 | LRR_4,HLH |
| Q8IXT2 UniProtKB reviewed (Swiss-Prot) |
DMRTC2 | Doublesex- and mab-3-related transcription factor C2 | Known | 9 | 1 | DM |
| Q8N9F8 UniProtKB reviewed (Swiss-Prot) |
ZNF454 | Zinc finger protein 454 | Known | 9 | 1 | zf-C2H2_4,DUF1806,zf-C2H2,YhfH,zf-C2H2_jaz,XPA_N,zf-met,zf-H2C2_2,C1_4,zf-RING_3,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,KRAB,GATA,zf-BED,CxxC_CxxC_SSSS,BolA |
| Q92908 UniProtKB reviewed (Swiss-Prot) |
GATA6 | Transcription factor GATA-6 (GATA-binding factor 6) | Known | 9 | 1 | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| Q92985 UniProtKB reviewed (Swiss-Prot) |
IRF7 | Interferon regulatory factor 7 (IRF-7) | Known | 9 | 1 | IRF,IRF-3 |
| Q96QS3 UniProtKB reviewed (Swiss-Prot) |
ARX | Homeobox protein ARX (Aristaless-related homeobox) | Known | 9 | 1 | Homeobox,DNA_pol_phi,OAR |
| Q96RI1 UniProtKB reviewed (Swiss-Prot) |
NR1H4 | Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4) (Retinoid X receptor-interacting protein 14) (RXR-interacting protein 14) | Known | 9 | 1 | Hormone_recep,zf-C4 |
| Q99081 UniProtKB reviewed (Swiss-Prot) |
TCF12 | Transcription factor 12 (TCF-12) (Class B basic helix-loop-helix protein 20) (bHLHb20) (DNA-binding protein HTF4) (E-box-binding protein) (Transcription factor HTF-4) | Known | 9 | 1 | HLH |
| Q99581 UniProtKB reviewed (Swiss-Prot) |
FEV | Protein FEV (Fifth Ewing variant protein) (PC12 ETS domain-containing transcription factor 1) (PC12 ETS factor 1) (Pet-1) | Known | 9 | 1 | Ets |
| Q99958 UniProtKB reviewed (Swiss-Prot) |
FOXC2 | Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14) | Known | 9 | 1 | Fork_head |
| Q9H2A3 UniProtKB reviewed (Swiss-Prot) |
NEUROG2 | Neurogenin-2 (NGN-2) (Class A basic helix-loop-helix protein 8) (bHLHa8) (Protein atonal homolog 4) | Known | 9 | 1 | HLH,Pacs-1 |
| Q9NP62 UniProtKB reviewed (Swiss-Prot) |
GCM1 | Chorion-specific transcription factor GCMa (hGCMa) (GCM motif protein 1) (Glial cells missing homolog 1) | Known | 9 | 1 | DUF1272,GCM |
| Q9NPC8 UniProtKB reviewed (Swiss-Prot) |
SIX2 | Homeobox protein SIX2 (Sine oculis homeobox homolog 2) | Known | 9 | 1 | HTH_3,Homez,Homeobox,KilA-N,Homeobox_KN |
| Q9NZC4 UniProtKB reviewed (Swiss-Prot) |
EHF | ETS homologous factor (hEHF) (ETS domain-containing transcription factor) (Epithelium-specific Ets transcription factor 3) (ESE-3) | Known | 9 | 1 | SAM_PNT,Ets |
| Q9UIH9 UniProtKB reviewed (Swiss-Prot) |
KLF15 | Krueppel-like factor 15 (Kidney-enriched krueppel-like factor) | Known | 9 | 1 | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-C2H2_6,zf-H2C2_2,DUF2225 |
| Q9UPW0 UniProtKB reviewed (Swiss-Prot) |
FOXJ3 | Forkhead box protein J3 | Known | 9 | 1 | Fork_head,DUF1639 |
| Q9Y261 UniProtKB reviewed (Swiss-Prot) |
FOXA2 | Hepatocyte nuclear factor 3-beta (HNF-3-beta) (HNF-3B) (Forkhead box protein A2) (Transcription factor 3B) (TCF-3B) | Known | 9 | 1 | HNF_C,Fork_head,Fork_head_N |
| Q9UBB5 UniProtKB reviewed (Swiss-Prot) |
MBD2 | Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2) | Known | 8 | 5 | MBD_C,MBD |
| Q15329 UniProtKB reviewed (Swiss-Prot) |
E2F5 | Transcription factor E2F5 (E2F-5) | Known | 8 | 3 | E2F_TDP |
| O00327 UniProtKB reviewed (Swiss-Prot) |
BMAL1 | Basic helix-loop-helix ARNT-like protein 1 (Aryl hydrocarbon receptor nuclear translocator-like protein 1) (Basic-helix-loop-helix-PAS protein MOP3) (Brain and muscle ARNT-like 1) (Class E basic helix-loop-helix protein 5) (bHLHe5) (Member of PAS protein 3) (PAS domain-containing protein 3) (bHLH-PAS protein JAP3) | Known | 8 | 1 | HLH,PAS,PAS_2,PAS_3,PAS_9,PAS_4 |
| O00470 UniProtKB reviewed (Swiss-Prot) |
MEIS1 | Homeobox protein Meis1 | Known | 8 | 1 | Homeobox,Homeobox_KN |
| O00482 UniProtKB reviewed (Swiss-Prot) |
NR5A2 | Nuclear receptor subfamily 5 group A member 2 (Alpha-1-fetoprotein transcription factor) (B1-binding factor) (hB1F) (CYP7A promoter-binding factor) (Hepatocytic transcription factor) (Liver receptor homolog 1) (LRH-1) | Known | 8 | 1 | zf-RING_2,Hormone_recep,zf-C4 |
| O14529 UniProtKB reviewed (Swiss-Prot) |
CUX2 | Homeobox protein cut-like 2 (Homeobox protein cux-2) | Known | 8 | 1 | Prefoldin_3,Minor_capsid_3,FH2,NPV_P10,Homeobox,Baculo_PEP_C,DUF4279,Homeobox_KN,CUT |
| O15178 UniProtKB reviewed (Swiss-Prot) |
TBXT | T-box transcription factor T (Brachyury protein) (Protein T) | Known | 8 | 1 | T-box |
| O15391 UniProtKB reviewed (Swiss-Prot) |
YY2 | Transcription factor YY2 (Yin and yang 2) (YY-2) (Zinc finger protein 631) | Known | 8 | 1 | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,CCAP,zf-H2C2_2,Transpos_assoc,Closter_coat,zf-C2H2_6 |
| O15516 UniProtKB reviewed (Swiss-Prot) |
CLOCK | Circadian locomoter output cycles protein kaput (hCLOCK) (EC 2.3.1.48) (Class E basic helix-loop-helix protein 8) (bHLHe8) | Known | 8 | 1 | PAS domain factors{1.2.5} |
| O43435 UniProtKB reviewed (Swiss-Prot) |
TBX1 | T-box transcription factor TBX1 (T-box protein 1) (Testis-specific T-box protein) | Known | 8 | 1 | T-box |
| O95936 UniProtKB reviewed (Swiss-Prot) |
EOMES | Eomesodermin homolog (T-box brain protein 2) (T-brain-2) (TBR-2) | Known | 8 | 1 | DUF539,T-box |
| P04637 UniProtKB reviewed (Swiss-Prot) |
TP53 | Cellular tumor antigen p53 (Antigen NY-CO-13) (Phosphoprotein p53) (Tumor suppressor p53) | Known | 8 | 1 | p53-related factors{6.3.1} |
| P09016 UniProtKB reviewed (Swiss-Prot) |
HOXD4 | Homeobox protein Hox-D4 (Homeobox protein HHO.C13) (Homeobox protein Hox-4B) (Homeobox protein Hox-5.1) | Known | 8 | 1 | Homeobox,SR-25,Homeobox_KN,DGF-1_C |
| P09017 UniProtKB reviewed (Swiss-Prot) |
HOXC4 | Homeobox protein Hox-C4 (Homeobox protein CP19) (Homeobox protein Hox-3E) | Known | 8 | 1 | Homeobox,DUF2209,Homeobox_KN |
| P10070 UniProtKB reviewed (Swiss-Prot) |
GLI2 | Transcription activator GLI2 (GLI family zinc finger protein 2) (Tax helper protein) [Cleaved into: Transcription repressor GLI2R] | Known | 8 | 1 | zf-C2H2_4,zf-H2C2_2,zf-C2H2,TP1 |
| P10071 UniProtKB reviewed (Swiss-Prot) |
GLI3 | Transcription activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full-length protein) (GLI3FL) [Cleaved into: Transcription repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)] | Known | 8 | 1 | zf-C2H2_4,zf-H2C2_2,zf-C2H2 |
| P10244 UniProtKB reviewed (Swiss-Prot) |
MYBL2 | Myb-related protein B (B-Myb) (Myb-like protein 2) | Known | 8 | 1 | Myb_DNA-bind_6,Myb_DNA-binding,Cmyb_C |
| P13056 UniProtKB reviewed (Swiss-Prot) |
NR2C1 | Nuclear receptor subfamily 2 group C member 1 (Orphan nuclear receptor TR2) (Testicular receptor 2) | Known | 8 | 1 | DUF2318,Hormone_recep,zf-C4 |
| P14652 UniProtKB reviewed (Swiss-Prot) |
HOXB2 | Homeobox protein Hox-B2 (Homeobox protein Hox-2.8) (Homeobox protein Hox-2H) (K8) | Known | 8 | 1 | Homeobox |
| P19484 UniProtKB reviewed (Swiss-Prot) |
TFEB | Transcription factor EB (Class E basic helix-loop-helix protein 35) (bHLHe35) | Known | 8 | 1 | DUF3678,HLH,DUF3371 |
| P19532 UniProtKB reviewed (Swiss-Prot) |
TFE3 | Transcription factor E3 (Class E basic helix-loop-helix protein 33) (bHLHe33) | Known | 8 | 1 | HLH,DUF3371 |
| P19622 UniProtKB reviewed (Swiss-Prot) |
EN2 | Homeobox protein engrailed-2 (Homeobox protein en-2) (Hu-En-2) | Known | 8 | 1 | CENP-B_N,Homeobox,Engrail_1_C_sig,Homeobox_KN,DUF2316 |
| P23511 UniProtKB reviewed (Swiss-Prot) |
NFYA | Nuclear transcription factor Y subunit alpha (CAAT box DNA-binding protein subunit A) (Nuclear transcription factor Y subunit A) (NF-YA) | Known | 8 | 1 | CBFB_NFYA,Bre5 |